Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL138713.1-201ENST00000624026 2130 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
IRF9Q00978 SOCS5P3-201ENST00000425115 1576 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 RPL23P2-201ENST00000320371 421 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 RNY3P13-201ENST00000365542 102 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 MT-TC-201ENST00000387405 66 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
IRF9Q00978 RNU6-1158P-201ENST00000391167 107 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 ARL4AP5-201ENST00000404372 599 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 RNA5SP118-201ENST00000410385 109 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.79□□□□□ -1.64
IRF9Q00978 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.79□□□□□ -1.64
IRF9Q00978 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.79□□□□□ -1.64
IRF9Q00978 RPS12P5-201ENST00000423449 371 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 BRWD1P3-201ENST00000428816 390 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 RBMY2QP-201ENST00000429799 1147 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 BNIP3P2-201ENST00000441221 577 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AC016691.1-201ENST00000441321 413 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.79□□□□□ -1.64
IRF9Q00978 SNRPGP6-201ENST00000451124 220 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.79□□□□□ -1.64
IRF9Q00978 NANOGP10-201ENST00000453325 895 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 MTND1P9-201ENST00000453775 944 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.79□□□□□ -1.64
IRF9Q00978 AC108059.3-201ENST00000456388 214 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AL445433.1-201ENST00000457507 257 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 CYCSP34-201ENST00000458172 304 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 RN7SL172P-201ENST00000460535 303 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AC053481.1-201ENST00000467217 306 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 RN7SL30P-201ENST00000488416 306 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.79□□□□□ -1.64
IRF9Q00978 RN7SL244P-201ENST00000493405 297 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 RN7SL558P-201ENST00000497468 299 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 AC020893.1-201ENST00000502452 580 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 HIGD1AP14-201ENST00000507617 282 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.79□□□□□ -1.64
IRF9Q00978 AC114786.4-201ENST00000508771 728 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.79□□□□□ -1.64
IRF9Q00978 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.79□□□□□ -1.64
IRF9Q00978 SNORA40.12-201ENST00000516329 111 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 Y_RNA.719-201ENST00000517156 106 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.79□□□□□ -1.64
IRF9Q00978 CENPUP1-201ENST00000526649 1202 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 OR4R1P-201ENST00000529879 463 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 OR5AN2P-201ENST00000534535 896 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.79□□□□□ -1.64
IRF9Q00978 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.79□□□□□ -1.64
IRF9Q00978 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.79□□□□□ -1.64
IRF9Q00978 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.79□□□□□ -1.64
IRF9Q00978 TVP23CP2-201ENST00000571473 623 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 SNORA74C-1-201ENST00000580726 201 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 COX6CP3-201ENST00000580869 223 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.79□□□□□ -1.64
IRF9Q00978 AC098848.2-201ENST00000588023 330 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AL355812.1-201ENST00000603215 216 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AC006329.2-201ENST00000611491 394 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AC245517.5-201ENST00000611529 162 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 AC040168.1-201ENST00000623594 991 ntBASIC4.79□□□□□ -1.64
IRF9Q00978 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.79□□□□□ -1.64
IRF9Q00978 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.79□□□□□ -1.64
IRF9Q00978 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.79□□□□□ -1.64
IRF9Q00978 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
IRF9Q00978 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.79□□□□□ -1.64
IRF9Q00978 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.79□□□□□ -1.64
IRF9Q00978 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IRF9Q00978 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.79□□□□□ -1.64
IRF9Q00978 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
IRF9Q00978 AC008079.2-201ENST00000623543 20396 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
IRF9Q00978 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.78□□□□□ -1.64
IRF9Q00978 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.78□□□□□ -1.64
IRF9Q00978 OR1S2-201ENST00000302592 978 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
IRF9Q00978 Y_RNA.61-201ENST00000362835 102 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 SNORA69-201ENST00000383895 132 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
IRF9Q00978 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.78□□□□□ -1.64
IRF9Q00978 RNU2-62P-201ENST00000410868 191 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.78□□□□□ -1.64
IRF9Q00978 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.78□□□□□ -1.64
IRF9Q00978 GNG5P5-201ENST00000420444 220 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.78□□□□□ -1.64
IRF9Q00978 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.78□□□□□ -1.64
IRF9Q00978 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.78□□□□□ -1.64
IRF9Q00978 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.78□□□□□ -1.64
IRF9Q00978 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.78□□□□□ -1.64
IRF9Q00978 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.78□□□□□ -1.64
IRF9Q00978 AC104651.2-201ENST00000447549 528 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 TPT1P14-201ENST00000448018 505 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.78□□□□□ -1.64
IRF9Q00978 RN7SL515P-201ENST00000463999 297 ntBASIC4.78□□□□□ -1.64
IRF9Q00978 HMGN1P12-201ENST00000499125 195 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms