Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC061975.8-201ENST00000587058 721 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AL365503.1-201ENST00000605247 905 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AL450489.1-201ENST00000612071 468 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 Z73965.1-201ENST00000623412 2297 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.71□□□□□ -2.14
PRKDCP78527 FGF7P8-201ENST00000402994 292 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AL138878.1-201ENST00000405131 347 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 RNA5SP107-201ENST00000411358 122 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.71□□□□□ -2.14
PRKDCP78527 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AC135628.1-201ENST00000568867 534 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.71□□□□□ -2.14
PRKDCP78527 AC010338.1-201ENST00000621823 717 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AC002064.3-201ENST00000623448 346 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AC016542.2-201ENST00000624201 619 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
PRKDCP78527 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.71□□□□□ -2.14
PRKDCP78527 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PRKDCP78527 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.71□□□□□ -2.14
PRKDCP78527 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PRKDCP78527 PWAR6-201ENST00000552334 4618 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.7□□□□□ -2.14
PRKDCP78527 AC016717.2-201ENST00000609089 5141 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.7□□□□□ -2.14
PRKDCP78527 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.7□□□□□ -2.14
PRKDCP78527 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.7□□□□□ -2.14
PRKDCP78527 RNU6-805P-201ENST00000365643 106 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 SNORA51.11-201ENST00000384442 131 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 MIR708-201ENST00000390708 88 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 RNU2-17P-201ENST00000410290 190 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AP1B1P2-201ENST00000416196 106 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AP004217.1-201ENST00000480579 346 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AC128657.1-201ENST00000549459 145 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AL355836.1-201ENST00000555951 870 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1.7□□□□□ -2.14
PRKDCP78527 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.7□□□□□ -2.14
PRKDCP78527 AL122125.1-201ENST00000616999 600 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PRKDCP78527 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PRKDCP78527 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
PRKDCP78527 MIR221-201ENST00000385135 110 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 MIR137-201ENST00000385223 102 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 RPL12P25-201ENST00000455592 494 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.7□□□□□ -2.14
PRKDCP78527 SNRPGP18-201ENST00000553000 214 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.7□□□□□ -2.14
PRKDCP78527 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.7□□□□□ -2.14
PRKDCP78527 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
PRKDCP78527 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
PRKDCP78527 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.7□□□□□ -2.14
PRKDCP78527 AC097714.1-201ENST00000511272 1647 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
PRKDCP78527 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
PRKDCP78527 MIR583-201ENST00000384846 75 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 MIR181B1-201ENST00000385240 110 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PRKDCP78527 VN1R17P-201ENST00000472048 1090 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.7□□□□□ -2.14
PRKDCP78527 FABP5P12-201ENST00000515543 389 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 AP000919.1-202ENST00000581139 1264 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 VN1R80P-201ENST00000597126 338 ntBASIC1.7□□□□□ -2.14
PRKDCP78527 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PRKDCP78527 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
PRKDCP78527 AL139156.1-201ENST00000412785 841 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PRKDCP78527 RPL7P54-201ENST00000438336 674 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
PRKDCP78527 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.69□□□□□ -2.14
PRKDCP78527 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 PVT1_3.1-201ENST00000620853 95 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PRKDCP78527 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PRKDCP78527 AC002543.1-201ENST00000299783 1954 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 HMGB1P10-201ENST00000395823 563 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 AL590004.2-201ENST00000404787 371 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 RPL23AP48-201ENST00000406913 488 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 BTF3P4-201ENST00000418852 495 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 AC006960.1-201ENST00000419980 153 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 AC133473.1-201ENST00000455173 299 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 AC021146.5-201ENST00000503544 545 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 RNA5SP490-201ENST00000517141 136 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PRKDCP78527 AC126177.3-201ENST00000551839 688 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PRKDCP78527 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PRKDCP78527 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.69□□□□□ -2.14
PRKDCP78527 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 AC126182.1-201ENST00000478134 357 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 ARL2BPP2-201ENST00000550907 489 ntBASIC1.69□□□□□ -2.14
PRKDCP78527 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.69□□□□□ -2.14
PRKDCP78527 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
PRKDCP78527 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.68□□□□□ -2.14
PRKDCP78527 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
PRKDCP78527 USP9YP20-201ENST00000419224 558 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms