Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 BPIFA4P-203ENST00000603168 689 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 MIR432-201ENST00000606207 94 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC012409.3-201ENST00000611343 981 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AC024941.1-201ENST00000612250 334 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 OR5AK4P-201ENST00000635912 903 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A1P61619 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A1P61619 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SEC61A1P61619 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SEC61A1P61619 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A1P61619 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A1P61619 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 ZNF962P-201ENST00000443465 3140 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 MTND5P26-201ENST00000426018 1752 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A1P61619 ELL2P4-201ENST00000446870 1376 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A1P61619 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A1P61619 ASNSP1-201ENST00000518311 1939 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
SEC61A1P61619 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A1P61619 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A1P61619 Y_RNA.248-201ENST00000364501 109 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 RN7SKP226-201ENST00000364912 300 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 RNU6-1283P-201ENST00000365314 105 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 Y_RNA.554-201ENST00000384672 102 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SEC61A1P61619 RPS3AP36-201ENST00000398190 775 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 DHFRP6-201ENST00000401776 268 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A1P61619 COX6CP17-201ENST00000421389 185 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 EIF1P1-201ENST00000421436 341 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A1P61619 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A1P61619 RPL7P28-201ENST00000437739 740 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 MTATP6P23-201ENST00000440153 476 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 CBX1P1-201ENST00000440184 427 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SEC61A1P61619 RPS26P56-201ENST00000444468 240 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AC104073.1-201ENST00000451988 151 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A1P61619 MTCO3P2-201ENST00000457365 171 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 RNU7-136P-201ENST00000458819 69 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 RPS20P21-201ENST00000466859 343 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A1P61619 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AC017037.1-201ENST00000508460 471 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AL592156.1-201ENST00000508758 304 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 NDUFB4P2-201ENST00000509515 391 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AC108043.1-201ENST00000512696 574 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A1P61619 MTND4LP18-201ENST00000526864 291 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 MED28P5-201ENST00000528254 438 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AP004247.1-201ENST00000531556 1289 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A1P61619 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A1P61619 MIR4284-201ENST00000578924 81 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A1P61619 MIR544B-201ENST00000582372 78 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AC067852.4-201ENST00000590314 478 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AC091834.1-201ENST00000614543 472 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AC083809.1-201ENST00000615051 472 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 AC008250.2-201ENST00000615261 205 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.78□□□□□ -1.8
SEC61A1P61619 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
SEC61A1P61619 AC025031.4-201ENST00000621248 3271 ntBASIC3.78□□□□□ -1.8
SEC61A1P61619 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A1P61619 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.81
SEC61A1P61619 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SEC61A1P61619 AC139769.1-204ENST00000472297 1931 ntBASIC3.78□□□□□ -1.81
SEC61A1P61619 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
SEC61A1P61619 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.77□□□□□ -1.81
SEC61A1P61619 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.77□□□□□ -1.81
SEC61A1P61619 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SEC61A1P61619 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SEC61A1P61619 MTND5P28-201ENST00000438005 1594 ntBASIC3.77□□□□□ -1.81
SEC61A1P61619 DCAF13P1-201ENST00000495256 1330 ntBASIC3.77□□□□□ -1.81
SEC61A1P61619 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SEC61A1P61619 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SEC61A1P61619 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SEC61A1P61619 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SEC61A1P61619 AC016769.3-201ENST00000396562 315 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms