Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RPL31P12-201ENST00000422587 358 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AL159987.2-201ENST00000432754 307 ntBASIC3.55□□□□□ -1.84
SRP54P61011 SEPT7P5-201ENST00000434048 306 ntBASIC3.55□□□□□ -1.84
SRP54P61011 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.55□□□□□ -1.84
SRP54P61011 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 GTF2IP7-202ENST00000436677 309 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP54P61011 AC079776.3-201ENST00000450665 370 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AP002884.2-201ENST00000471647 395 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.55□□□□□ -1.84
SRP54P61011 AL024509.2-201ENST00000493462 493 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AC004069.2-201ENST00000505438 1114 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AC026784.1-201ENST00000507986 352 ntBASIC3.55□□□□□ -1.84
SRP54P61011 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SRP54P61011 AC118942.1-201ENST00000529674 1035 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP54P61011 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SRP54P61011 UBE2NP1-201ENST00000545592 458 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AC023161.2-201ENST00000551218 780 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AL121603.1-201ENST00000553815 142 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AL845331.3-202ENST00000562856 261 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AL606834.3-201ENST00000602615 496 ntBASIC3.55□□□□□ -1.84
SRP54P61011 AC024060.1-201ENST00000607052 494 ntBASIC3.55□□□□□ -1.84
SRP54P61011 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 MIR7851-201ENST00000610611 160 ntBASIC3.55□□□□□ -1.84
SRP54P61011 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SRP54P61011 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SRP54P61011 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SRP54P61011 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP54P61011 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SRP54P61011 AC021755.1-201ENST00000559747 1447 ntBASIC3.54□□□□□ -1.84
SRP54P61011 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 RNA5SP50-201ENST00000363731 107 ntBASIC3.54□□□□□ -1.84
SRP54P61011 Y_RNA.333-201ENST00000365274 102 ntBASIC3.54□□□□□ -1.84
SRP54P61011 RNU6-657P-201ENST00000383904 107 ntBASIC3.54□□□□□ -1.84
SRP54P61011 SNORA11.1-201ENST00000408133 129 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 BX842559.1-201ENST00000419615 532 ntBASIC3.54□□□□□ -1.84
SRP54P61011 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 RPF2P1-201ENST00000424137 906 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 NEK4P1-201ENST00000433383 879 ntBASIC3.54□□□□□ -1.84
SRP54P61011 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 NDUFB1P1-201ENST00000435191 180 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.54□□□□□ -1.84
SRP54P61011 AC093155.1-201ENST00000440164 826 ntBASIC3.54□□□□□ -1.84
SRP54P61011 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SRP54P61011 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 HMGN2P16-201ENST00000456802 261 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AC079203.1-201ENST00000487972 404 ntBASIC3.54□□□□□ -1.84
SRP54P61011 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP54P61011 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP54P61011 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.54□□□□□ -1.84
SRP54P61011 SNORA70.18-201ENST00000516696 98 ntBASIC3.54□□□□□ -1.84
SRP54P61011 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.54□□□□□ -1.84
SRP54P61011 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.54□□□□□ -1.84
SRP54P61011 AC099489.2-201ENST00000574976 260 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.54□□□□□ -1.84
SRP54P61011 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP54P61011 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.54□□□□□ -1.84
SRP54P61011 AL022067.1-201ENST00000602426 454 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AL035411.2-201ENST00000604022 421 ntBASIC3.54□□□□□ -1.84
SRP54P61011 ELOCP35-201ENST00000604289 336 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AC012468.1-201ENST00000604888 430 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AC069545.1-201ENST00000605671 358 ntBASIC3.54□□□□□ -1.84
SRP54P61011 MIR7975-201ENST00000619350 68 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AL732618.1-201ENST00000623251 301 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AC104985.3-201ENST00000623479 597 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AC040168.1-201ENST00000623594 991 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AC092184.1-201ENST00000625042 715 ntBASIC3.54□□□□□ -1.84
SRP54P61011 SNORA50A-202ENST00000629536 136 ntBASIC3.54□□□□□ -1.84
SRP54P61011 CYP3A51P-201ENST00000633513 256 ntBASIC3.54□□□□□ -1.84
SRP54P61011 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.54□□□□□ -1.84
SRP54P61011 MKKS-204ENST00000639674 192 ntBASIC3.54□□□□□ -1.84
SRP54P61011 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SRP54P61011 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP54P61011 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP54P61011 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.54□□□□□ -1.84
SRP54P61011 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.54□□□□□ -1.84
SRP54P61011 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SRP54P61011 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.53□□□□□ -1.84
SRP54P61011 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.84
SRP54P61011 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SRP54P61011 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SRP54P61011 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 RNU4-51P-201ENST00000364206 140 ntBASIC3.53□□□□□ -1.84
SRP54P61011 RNU6-224P-201ENST00000384055 107 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms