Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.37□□□□□ -1.71
CLRN1P58418 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.37□□□□□ -1.71
CLRN1P58418 AC104651.2-201ENST00000447549 528 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 AC073850.1-201ENST00000449243 255 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 RNU6-261P-201ENST00000459506 102 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 RN7SL517P-201ENST00000462240 305 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 RPSAP50-201ENST00000481955 852 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 OR5H5P-201ENST00000503164 928 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 AC005798.1-201ENST00000513715 387 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 RNA5SP401-201ENST00000515920 127 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 SNORA40.12-201ENST00000516329 111 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 IGKV2D-36-201ENST00000518643 226 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 PHBP17-201ENST00000528576 541 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 OR4R1P-201ENST00000529879 463 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.37□□□□□ -1.71
CLRN1P58418 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.37□□□□□ -1.71
CLRN1P58418 HMGB1P6-201ENST00000569046 646 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 CYCSP40-201ENST00000575927 294 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 SNORA74C-1-201ENST00000580726 201 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 AC098848.2-201ENST00000588023 330 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 AC007038.2-201ENST00000608095 740 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 AC093648.1-201ENST00000623546 606 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 AC091925.2-201ENST00000625059 256 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 AL353662.3-201ENST00000625131 237 ntBASIC4.37□□□□□ -1.71
CLRN1P58418 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN1P58418 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN1P58418 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.37□□□□□ -1.71
CLRN1P58418 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN1P58418 MAPK10-263ENST00000641052 4307 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN1P58418 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.36□□□□□ -1.71
CLRN1P58418 OR1S2-201ENST00000302592 978 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN1P58418 Y_RNA.263-201ENST00000364659 114 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RNY3P13-201ENST00000365542 102 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 MIR765-201ENST00000390226 114 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN1P58418 RNA5SP118-201ENST00000410385 109 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RNU4-34P-201ENST00000410431 124 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RNU6-1068P-201ENST00000410958 103 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.36□□□□□ -1.71
CLRN1P58418 TBCAP2-201ENST00000416175 326 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AC016831.2-201ENST00000417179 352 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 EIF1P3-201ENST00000423841 334 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RBMY2QP-201ENST00000429799 1147 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN1P58418 RHOT1P3-201ENST00000436571 331 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.36□□□□□ -1.71
CLRN1P58418 PRPF38AP2-201ENST00000438179 851 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AC093156.1-201ENST00000440382 670 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AC093019.1-201ENST00000443135 252 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RAC1P7-201ENST00000445367 377 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN1P58418 BTF3P6-201ENST00000448054 499 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN1P58418 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN1P58418 NANOGP10-201ENST00000453325 895 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN1P58418 RPS20P24-201ENST00000457473 361 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 SNORD121B-201ENST00000458838 81 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RN7SL515P-201ENST00000463999 297 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RN7SL97P-201ENST00000486780 299 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AL139099.1-201ENST00000497398 403 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AC140172.1-201ENST00000502928 141 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN1P58418 AC139783.2-201ENST00000504847 1145 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN1P58418 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN1P58418 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN1P58418 RNU6-27P-201ENST00000516146 107 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 SCARNA21.2-201ENST00000516600 166 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RNU6-410P-201ENST00000517006 107 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN1P58418 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN1P58418 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN1P58418 AC055876.1-202ENST00000567053 138 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN1P58418 AC005261.5-201ENST00000596280 355 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN1P58418 AC138649.5-201ENST00000637456 137 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN1P58418 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN1P58418 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN1P58418 ZNF734P-201ENST00000419494 1534 ntBASIC4.36□□□□□ -1.71
CLRN1P58418 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN1P58418 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms