Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH6P55285 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
CDH6P55285 AC004925.1-201ENST00000624256 2706 ntBASIC3.24□□□□□ -1.89
CDH6P55285 MAPK10-362ENST00000641864 4484 ntBASIC3.24□□□□□ -1.89
CDH6P55285 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH6P55285 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH6P55285 RNU1-101P-201ENST00000391171 127 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AC110754.1-201ENST00000399740 601 ntBASIC3.24□□□□□ -1.89
CDH6P55285 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CDH6P55285 RNA5SP129-201ENST00000410276 118 ntBASIC3.24□□□□□ -1.89
CDH6P55285 RNU4-27P-201ENST00000410889 139 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH6P55285 AC091862.1-201ENST00000438016 1100 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AC002542.1-201ENST00000440683 193 ntBASIC3.24□□□□□ -1.89
CDH6P55285 RN7SL807P-201ENST00000470923 297 ntBASIC3.24□□□□□ -1.89
CDH6P55285 RPL7P49-201ENST00000471402 708 ntBASIC3.24□□□□□ -1.89
CDH6P55285 OR5H5P-201ENST00000503164 928 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH6P55285 SNORA31.20-201ENST00000517111 133 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AC245166.1-201ENST00000521012 253 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH6P55285 AP000916.1-201ENST00000533869 835 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH6P55285 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH6P55285 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.24□□□□□ -1.89
CDH6P55285 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH6P55285 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH6P55285 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AL671309.1-201ENST00000603750 544 ntBASIC3.24□□□□□ -1.89
CDH6P55285 MIR7112-201ENST00000616126 65 ntBASIC3.24□□□□□ -1.89
CDH6P55285 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
CDH6P55285 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH6P55285 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH6P55285 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH6P55285 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH6P55285 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CDH6P55285 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH6P55285 MTND5P1-201ENST00000445440 1375 ntBASIC3.24□□□□□ -1.89
CDH6P55285 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CDH6P55285 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH6P55285 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.23□□□□□ -1.89
CDH6P55285 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH6P55285 RNVU1-3-201ENST00000364313 161 ntBASIC3.23□□□□□ -1.89
CDH6P55285 DEFB109C-201ENST00000382575 264 ntBASIC3.23□□□□□ -1.89
CDH6P55285 DEFB109B-201ENST00000382656 264 ntBASIC3.23□□□□□ -1.89
CDH6P55285 MIR649-201ENST00000384843 97 ntBASIC3.23□□□□□ -1.89
CDH6P55285 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.23□□□□□ -1.89
CDH6P55285 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH6P55285 AC245054.2-201ENST00000415639 319 ntBASIC3.23□□□□□ -1.89
CDH6P55285 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH6P55285 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH6P55285 FAM204CP-201ENST00000424489 642 ntBASIC3.23□□□□□ -1.89
CDH6P55285 AC006548.1-201ENST00000427470 102 ntBASIC3.23□□□□□ -1.89
CDH6P55285 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH6P55285 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH6P55285 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH6P55285 AL500527.1-201ENST00000448532 255 ntBASIC3.23□□□□□ -1.89
CDH6P55285 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH6P55285 AC089999.1-201ENST00000460336 374 ntBASIC3.23□□□□□ -1.89
CDH6P55285 RPL21P8-201ENST00000465083 535 ntBASIC3.23□□□□□ -1.89
CDH6P55285 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH6P55285 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH6P55285 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH6P55285 HMGB1P1-201ENST00000522557 636 ntBASIC3.23□□□□□ -1.89
CDH6P55285 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH6P55285 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH6P55285 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH6P55285 MTCO3P24-201ENST00000572729 782 ntBASIC3.23□□□□□ -1.89
CDH6P55285 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH6P55285 BPTFP1-201ENST00000579209 492 ntBASIC3.23□□□□□ -1.89
CDH6P55285 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH6P55285 SRGNP1-201ENST00000603392 451 ntBASIC3.23□□□□□ -1.89
CDH6P55285 AC024220.1-201ENST00000603675 484 ntBASIC3.23□□□□□ -1.89
CDH6P55285 AC025588.3-201ENST00000604182 274 ntBASIC3.23□□□□□ -1.89
CDH6P55285 VN1R9P-201ENST00000614184 867 ntBASIC3.23□□□□□ -1.89
CDH6P55285 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH6P55285 AC018692.3-201ENST00000623929 123 ntBASIC3.23□□□□□ -1.89
CDH6P55285 CR381572.1-201ENST00000625098 102 ntBASIC3.23□□□□□ -1.89
CDH6P55285 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
CDH6P55285 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH6P55285 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH6P55285 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH6P55285 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH6P55285 AC002546.1-201ENST00000588041 2504 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AC093908.1-201ENST00000623125 8092 ntBASIC3.22□□□□□ -1.89
CDH6P55285 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH6P55285 RNU6-50P-201ENST00000362356 103 ntBASIC3.22□□□□□ -1.89
CDH6P55285 RNU6-761P-201ENST00000384148 107 ntBASIC3.22□□□□□ -1.89
CDH6P55285 RNU6-921P-201ENST00000384361 107 ntBASIC3.22□□□□□ -1.89
CDH6P55285 SNORA46-201ENST00000384762 135 ntBASIC3.22□□□□□ -1.89
CDH6P55285 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
CDH6P55285 OR51A3P-201ENST00000413596 924 ntBASIC3.22□□□□□ -1.89
CDH6P55285 RAD23BP2-201ENST00000416003 1207 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AL357078.2-201ENST00000416486 427 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AL353678.1-201ENST00000422735 741 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AL121882.1-201ENST00000422893 417 ntBASIC3.22□□□□□ -1.89
CDH6P55285 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH6P55285 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.22□□□□□ -1.89
CDH6P55285 RPL7P46-201ENST00000425129 740 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms