Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ARF4P4-201ENST00000439608 520 ntBASIC3.69□□□□□ -1.82
VCPP55072 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.69□□□□□ -1.82
VCPP55072 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.69□□□□□ -1.82
VCPP55072 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.69□□□□□ -1.82
VCPP55072 RSL24D1P3-201ENST00000449255 495 ntBASIC3.69□□□□□ -1.82
VCPP55072 U3.44-201ENST00000458938 192 ntBASIC3.69□□□□□ -1.82
VCPP55072 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.69□□□□□ -1.82
VCPP55072 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.69□□□□□ -1.82
VCPP55072 AC097462.2-201ENST00000504623 481 ntBASIC3.69□□□□□ -1.82
VCPP55072 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.69□□□□□ -1.82
VCPP55072 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.69□□□□□ -1.82
VCPP55072 RPL12P22-201ENST00000519073 490 ntBASIC3.69□□□□□ -1.82
VCPP55072 AL139174.1-201ENST00000531489 886 ntBASIC3.69□□□□□ -1.82
VCPP55072 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.69□□□□□ -1.82
VCPP55072 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.69□□□□□ -1.82
VCPP55072 MIR3186-201ENST00000577404 85 ntBASIC3.69□□□□□ -1.82
VCPP55072 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.69□□□□□ -1.82
VCPP55072 AC136601.2-201ENST00000604356 474 ntBASIC3.69□□□□□ -1.82
VCPP55072 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.69□□□□□ -1.82
VCPP55072 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.69□□□□□ -1.82
VCPP55072 MIR7851-201ENST00000610611 160 ntBASIC3.69□□□□□ -1.82
VCPP55072 AL354976.1-201ENST00000613843 387 ntBASIC3.69□□□□□ -1.82
VCPP55072 AC069209.1-201ENST00000619282 651 ntBASIC3.69□□□□□ -1.82
VCPP55072 AL121594.5-201ENST00000631724 573 ntBASIC3.69□□□□□ -1.82
VCPP55072 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VCPP55072 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
VCPP55072 AC007256.1-201ENST00000392253 2765 ntBASIC3.68□□□□□ -1.82
VCPP55072 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VCPP55072 AC025263.3-201ENST00000622965 1396 ntBASIC3.68□□□□□ -1.82
VCPP55072 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VCPP55072 MIR449A-201ENST00000362113 91 ntBASIC3.68□□□□□ -1.82
VCPP55072 RNA5SP295-201ENST00000362655 121 ntBASIC3.68□□□□□ -1.82
VCPP55072 RNU6-353P-201ENST00000364266 108 ntBASIC3.68□□□□□ -1.82
VCPP55072 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VCPP55072 SNORD17-201ENST00000390930 237 ntBASIC3.68□□□□□ -1.82
VCPP55072 AC092638.1-201ENST00000411966 1275 ntBASIC3.68□□□□□ -1.82
VCPP55072 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.68□□□□□ -1.82
VCPP55072 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.68□□□□□ -1.82
VCPP55072 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.68□□□□□ -1.82
VCPP55072 VDAC1P3-201ENST00000434069 851 ntBASIC3.68□□□□□ -1.82
VCPP55072 AL590103.1-201ENST00000434488 307 ntBASIC3.68□□□□□ -1.82
VCPP55072 HMGB1P12-201ENST00000438594 598 ntBASIC3.68□□□□□ -1.82
VCPP55072 Z99714.1-201ENST00000450463 807 ntBASIC3.68□□□□□ -1.82
VCPP55072 NF1P3-201ENST00000457709 450 ntBASIC3.68□□□□□ -1.82
VCPP55072 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VCPP55072 AC026414.1-201ENST00000504046 698 ntBASIC3.68□□□□□ -1.82
VCPP55072 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.68□□□□□ -1.82
VCPP55072 RNU6-416P-201ENST00000516265 103 ntBASIC3.68□□□□□ -1.82
VCPP55072 RN7SKP60-201ENST00000516985 239 ntBASIC3.68□□□□□ -1.82
VCPP55072 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.68□□□□□ -1.82
VCPP55072 AC026333.2-201ENST00000542164 106 ntBASIC3.68□□□□□ -1.82
VCPP55072 DUXAP6-201ENST00000553858 601 ntBASIC3.68□□□□□ -1.82
VCPP55072 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.68□□□□□ -1.82
VCPP55072 TGIF1P1-201ENST00000558095 802 ntBASIC3.68□□□□□ -1.82
VCPP55072 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.68□□□□□ -1.82
VCPP55072 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.68□□□□□ -1.82
VCPP55072 AC034105.3-201ENST00000565294 442 ntBASIC3.68□□□□□ -1.82
VCPP55072 MTCO1P40-201ENST00000574371 625 ntBASIC3.68□□□□□ -1.82
VCPP55072 MIR3945-201ENST00000581853 98 ntBASIC3.68□□□□□ -1.82
VCPP55072 RPL12P50-201ENST00000603116 116 ntBASIC3.68□□□□□ -1.82
VCPP55072 AC009948.4-201ENST00000604692 675 ntBASIC3.68□□□□□ -1.82
VCPP55072 IGHV3-29-201ENST00000604817 344 ntBASIC3.68□□□□□ -1.82
VCPP55072 AP002802.2-201ENST00000605877 235 ntBASIC3.68□□□□□ -1.82
VCPP55072 AC110801.1-201ENST00000623590 212 ntBASIC3.68□□□□□ -1.82
VCPP55072 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.68□□□□□ -1.82
VCPP55072 AC116096.1-201ENST00000566804 2314 ntBASIC3.68□□□□□ -1.82
VCPP55072 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VCPP55072 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
VCPP55072 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VCPP55072 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
VCPP55072 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.67□□□□□ -1.82
VCPP55072 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCPP55072 SAGE4P-201ENST00000442271 3381 ntBASIC3.67□□□□□ -1.82
VCPP55072 ZNF37BP-203ENST00000452306 1352 ntBASIC3.67□□□□□ -1.82
VCPP55072 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCPP55072 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VCPP55072 SNORA5B-201ENST00000363786 132 ntBASIC3.67□□□□□ -1.82
VCPP55072 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCPP55072 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VCPP55072 AC096533.1-201ENST00000411645 353 ntBASIC3.67□□□□□ -1.82
VCPP55072 TAF13P2-201ENST00000416876 286 ntBASIC3.67□□□□□ -1.82
VCPP55072 PTP4A1P7-201ENST00000423476 514 ntBASIC3.67□□□□□ -1.82
VCPP55072 AL009174.1-201ENST00000426577 416 ntBASIC3.67□□□□□ -1.82
VCPP55072 AL592437.1-201ENST00000443781 492 ntBASIC3.67□□□□□ -1.82
VCPP55072 SLC31A1P1-201ENST00000451221 567 ntBASIC3.67□□□□□ -1.82
VCPP55072 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.67□□□□□ -1.82
VCPP55072 HMGN2P16-201ENST00000456802 261 ntBASIC3.67□□□□□ -1.82
VCPP55072 RN7SL594P-201ENST00000470590 287 ntBASIC3.67□□□□□ -1.82
VCPP55072 RPS27P23-201ENST00000487608 251 ntBASIC3.67□□□□□ -1.82
VCPP55072 AC008427.1-201ENST00000503102 655 ntBASIC3.67□□□□□ -1.82
VCPP55072 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.67□□□□□ -1.82
VCPP55072 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.67□□□□□ -1.82
VCPP55072 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.67□□□□□ -1.82
VCPP55072 EIF5A2P1-201ENST00000564027 460 ntBASIC3.67□□□□□ -1.82
VCPP55072 OR4G1P-201ENST00000588632 938 ntBASIC3.67□□□□□ -1.82
VCPP55072 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.67□□□□□ -1.82
VCPP55072 VN1R87P-201ENST00000596706 487 ntBASIC3.67□□□□□ -1.82
VCPP55072 AC092628.2-201ENST00000622492 339 ntBASIC3.67□□□□□ -1.82
VCPP55072 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.67□□□□□ -1.82
VCPP55072 AL109659.3-201ENST00000624985 950 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms