Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SNORA70.4-201ENST00000365509 134 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 RNA5SP424-201ENST00000390988 115 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCN3P51790 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN3P51790 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCN3P51790 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC016907.1-201ENST00000419483 435 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC092427.1-201ENST00000439177 601 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 MTND5P2-201ENST00000442927 1142 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 VN1R10P-201ENST00000447106 875 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 RPL29P29-201ENST00000448725 423 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 PDSS1P2-201ENST00000449397 678 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC092757.1-201ENST00000467293 467 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC106707.2-201ENST00000484182 374 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 NCOR1P1-202ENST00000486162 291 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCN3P51790 TRBV12-2-201ENST00000489763 344 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 RPS6P4-201ENST00000494693 758 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AC021146.8-201ENST00000507455 733 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN3P51790 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCN3P51790 HNRNPKP5-201ENST00000515300 253 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 RNU6-583P-201ENST00000516012 92 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 OR8L1P-201ENST00000534005 955 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.09□□□□□ -1.75
CLCN3P51790 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCN3P51790 MTCYBP33-201ENST00000575007 1130 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 AP001180.3-201ENST00000582221 145 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 VN1R90P-201ENST00000595717 726 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AC103881.1-201ENST00000603476 538 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AL031281.1-201ENST00000604049 488 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AL513477.2-201ENST00000607858 568 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 AC079248.2-201ENST00000623779 326 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN3P51790 MIR6715B-201ENST00000637172 77 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLCN3P51790 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN3P51790 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CLCN3P51790 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 AC007823.1-201ENST00000569932 1566 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLCN3P51790 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLCN3P51790 AL079343.1-201ENST00000572358 1771 ntBASIC4.09□□□□□ -1.76
CLCN3P51790 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLCN3P51790 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CLCN3P51790 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN3P51790 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 MIR1250-201ENST00000408098 113 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 MIR1284-201ENST00000408337 120 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN3P51790 PSMA2P3-201ENST00000429685 675 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 CYCSP43-201ENST00000438233 310 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 MTCYBP34-201ENST00000439552 670 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 MTND2P4-201ENST00000445034 1004 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN3P51790 RPL39P6-201ENST00000448289 150 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 TRGVB-201ENST00000453257 471 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 USP9YP10-201ENST00000454868 628 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.08□□□□□ -1.76
CLCN3P51790 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 AC114981.1-201ENST00000503897 678 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.08□□□□□ -1.76
CLCN3P51790 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 USP9YP5-201ENST00000511770 630 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 MTCO1P24-201ENST00000515438 1558 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN3P51790 AC090819.1-201ENST00000523800 1111 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN3P51790 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.08□□□□□ -1.76
CLCN3P51790 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN3P51790 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.08□□□□□ -1.76
CLCN3P51790 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.08□□□□□ -1.76
CLCN3P51790 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN3P51790 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms