Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC008687.2-201ENST00000597865 520 ntBASIC5.7□□□□□ -1.5
USP11P51784 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.7□□□□□ -1.5
USP11P51784 RNU6-89P-201ENST00000606519 100 ntBASIC5.7□□□□□ -1.5
USP11P51784 AC133644.2-201ENST00000608142 540 ntBASIC5.7□□□□□ -1.5
USP11P51784 AC009318.4-201ENST00000620496 486 ntBASIC5.7□□□□□ -1.5
USP11P51784 uc_338.22-201ENST00000622722 187 ntBASIC5.7□□□□□ -1.5
USP11P51784 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.7□□□□□ -1.5
USP11P51784 OR2L1P-202ENST00000641567 1023 ntBASIC5.7□□□□□ -1.5
USP11P51784 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 AC093591.2-201ENST00000565254 3843 ntBASIC5.7□□□□□ -1.5
USP11P51784 ASNSP3-201ENST00000451989 1306 ntBASIC5.7□□□□□ -1.5
USP11P51784 MTND5P33-201ENST00000571250 1450 ntBASIC5.7□□□□□ -1.5
USP11P51784 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
USP11P51784 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
USP11P51784 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 AL450345.1-202ENST00000605741 3881 ntBASIC5.69□□□□□ -1.5
USP11P51784 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.69□□□□□ -1.5
USP11P51784 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 RNU6-984P-201ENST00000363236 109 ntBASIC5.69□□□□□ -1.5
USP11P51784 Y_RNA.193-201ENST00000363979 102 ntBASIC5.69□□□□□ -1.5
USP11P51784 Y_RNA.197-201ENST00000364004 102 ntBASIC5.69□□□□□ -1.5
USP11P51784 Y_RNA.301-201ENST00000364990 103 ntBASIC5.69□□□□□ -1.5
USP11P51784 RNU6-996P-201ENST00000365438 107 ntBASIC5.69□□□□□ -1.5
USP11P51784 RNU4-20P-201ENST00000365601 151 ntBASIC5.69□□□□□ -1.5
USP11P51784 Y_RNA.452-201ENST00000384202 108 ntBASIC5.69□□□□□ -1.5
USP11P51784 AL109941.1-201ENST00000401925 229 ntBASIC5.69□□□□□ -1.5
USP11P51784 AL592114.1-201ENST00000403842 483 ntBASIC5.69□□□□□ -1.5
USP11P51784 RNU6-1304P-201ENST00000411374 106 ntBASIC5.69□□□□□ -1.5
USP11P51784 CHEK2P3-201ENST00000416118 248 ntBASIC5.69□□□□□ -1.5
USP11P51784 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 AC010881.1-201ENST00000433830 235 ntBASIC5.69□□□□□ -1.5
USP11P51784 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.69□□□□□ -1.5
USP11P51784 AC073415.1-201ENST00000449240 153 ntBASIC5.69□□□□□ -1.5
USP11P51784 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 AL356010.1-201ENST00000456364 102 ntBASIC5.69□□□□□ -1.5
USP11P51784 RPL37P3-201ENST00000456825 293 ntBASIC5.69□□□□□ -1.5
USP11P51784 APOOP2-201ENST00000461561 539 ntBASIC5.69□□□□□ -1.5
USP11P51784 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 AC012181.1-201ENST00000479895 423 ntBASIC5.69□□□□□ -1.5
USP11P51784 RN7SL319P-201ENST00000480656 221 ntBASIC5.69□□□□□ -1.5
USP11P51784 AC140172.1-201ENST00000502928 141 ntBASIC5.69□□□□□ -1.5
USP11P51784 PTP4A1P4-201ENST00000512479 322 ntBASIC5.69□□□□□ -1.5
USP11P51784 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.69□□□□□ -1.5
USP11P51784 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.69□□□□□ -1.5
USP11P51784 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.69□□□□□ -1.5
USP11P51784 OR4R1P-201ENST00000529879 463 ntBASIC5.69□□□□□ -1.5
USP11P51784 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 AC063950.1-201ENST00000552036 308 ntBASIC5.69□□□□□ -1.5
USP11P51784 AL117187.1-201ENST00000555482 181 ntBASIC5.69□□□□□ -1.5
USP11P51784 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.69□□□□□ -1.5
USP11P51784 AL669831.4-202ENST00000590817 238 ntBASIC5.69□□□□□ -1.5
USP11P51784 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.69□□□□□ -1.5
USP11P51784 AP001330.4-201ENST00000604350 154 ntBASIC5.69□□□□□ -1.5
USP11P51784 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 uc_338.9-201ENST00000617424 182 ntBASIC5.69□□□□□ -1.5
USP11P51784 AC074140.1-201ENST00000621617 208 ntBASIC5.69□□□□□ -1.5
USP11P51784 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
USP11P51784 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.69□□□□□ -1.5
USP11P51784 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 INTS6P1-201ENST00000504674 2530 ntBASIC5.69□□□□□ -1.5
USP11P51784 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP11P51784 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.69□□□□□ -1.5
USP11P51784 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.68□□□□□ -1.5
USP11P51784 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.68□□□□□ -1.5
USP11P51784 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP11P51784 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP11P51784 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP11P51784 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
USP11P51784 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP11P51784 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP11P51784 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP11P51784 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.68□□□□□ -1.5
USP11P51784 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
USP11P51784 RN7SKP104-201ENST00000362605 328 ntBASIC5.68□□□□□ -1.5
USP11P51784 RNA5SP123-201ENST00000363244 119 ntBASIC5.68□□□□□ -1.5
USP11P51784 RNU6-744P-201ENST00000365557 107 ntBASIC5.68□□□□□ -1.5
USP11P51784 RNU6-1316P-201ENST00000384242 108 ntBASIC5.68□□□□□ -1.5
USP11P51784 RN7SKP16-201ENST00000410180 299 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC005517.2-201ENST00000424673 553 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms