Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 HMGB3P11-201ENST00000440127 604 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 AC092641.1-201ENST00000440229 772 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.92□□□□□ -1.94
CX3CR1P49238 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.92□□□□□ -1.94
CX3CR1P49238 MOB1AP2-201ENST00000446060 614 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 AL096829.2-201ENST00000446582 742 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 RPL21P23-201ENST00000446654 460 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 AL133547.1-201ENST00000448546 220 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.92□□□□□ -1.94
CX3CR1P49238 BTF3P5-201ENST00000457252 467 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.92□□□□□ -1.94
CX3CR1P49238 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
CX3CR1P49238 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.92□□□□□ -1.94
CX3CR1P49238 RNU6-334P-201ENST00000517072 102 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CX3CR1P49238 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.92□□□□□ -1.94
CX3CR1P49238 AC245166.1-201ENST00000521012 253 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
CX3CR1P49238 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.92□□□□□ -1.94
CX3CR1P49238 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.92□□□□□ -1.94
CX3CR1P49238 OR4R2P-201ENST00000530815 597 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.92□□□□□ -1.94
CX3CR1P49238 AL136520.1-202ENST00000555494 763 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.92□□□□□ -1.94
CX3CR1P49238 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.92□□□□□ -1.94
CX3CR1P49238 BDH2P1-201ENST00000602288 736 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 AC099778.2-201ENST00000610904 211 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 SNORD39.4-201ENST00000620099 78 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 CR392039.5-201ENST00000623201 510 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 AL356863.1-201ENST00000623378 1080 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 SNORA50A-202ENST00000629536 136 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.92□□□□□ -1.94
CX3CR1P49238 AC127502.3-201ENST00000636170 1206 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 NUP58P1-201ENST00000502546 1738 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.92□□□□□ -1.94
CX3CR1P49238 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CX3CR1P49238 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CX3CR1P49238 CR383658.2-201ENST00000547576 1525 ntBASIC2.92□□□□□ -1.94
CX3CR1P49238 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CX3CR1P49238 SGO1P2-201ENST00000429458 1589 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AL049780.3-201ENST00000624612 1583 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.91□□□□□ -1.94
CX3CR1P49238 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CX3CR1P49238 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CX3CR1P49238 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.91□□□□□ -1.94
CX3CR1P49238 RNU6-549P-201ENST00000384433 107 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 U3.29-201ENST00000391296 212 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AL354719.1-201ENST00000406535 843 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CX3CR1P49238 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AC012497.1-201ENST00000429392 575 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 CST9LP2-201ENST00000437612 320 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.91□□□□□ -1.94
CX3CR1P49238 RBMY2UP-201ENST00000453474 324 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
CX3CR1P49238 GAPDHP39-201ENST00000481866 979 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 MLLT10P2-201ENST00000506434 249 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 KLHL2P1-201ENST00000508691 521 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AC010265.1-201ENST00000513509 211 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 IGKV2-26-201ENST00000518305 343 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 UBE2NP1-201ENST00000545592 458 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AC005476.1-201ENST00000554427 397 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.91□□□□□ -1.94
CX3CR1P49238 AC093519.1-201ENST00000566109 298 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.91□□□□□ -1.94
CX3CR1P49238 MTCO3P24-201ENST00000572729 782 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AC090666.1-201ENST00000578241 445 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AC093227.2-201ENST00000589357 285 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AC008962.1-201ENST00000605729 304 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 VN1R74P-201ENST00000613259 503 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AL731566.2-201ENST00000618971 317 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 AL356321.1-201ENST00000621360 228 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.91□□□□□ -1.94
CX3CR1P49238 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.91□□□□□ -1.94
CX3CR1P49238 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.91□□□□□ -1.94
CX3CR1P49238 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CX3CR1P49238 AC004972.1-201ENST00000623934 2209 ntBASIC2.91□□□□□ -1.94
CX3CR1P49238 ZNF807-201ENST00000328088 1707 ntBASIC2.9□□□□□ -1.94
CX3CR1P49238 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.9□□□□□ -1.94
CX3CR1P49238 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
CX3CR1P49238 AL356274.2-201ENST00000624379 3752 ntBASIC2.9□□□□□ -1.94
CX3CR1P49238 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CX3CR1P49238 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CX3CR1P49238 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CX3CR1P49238 RNU6-354P-201ENST00000383862 107 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms