Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFSF9P41273 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TNFSF9P41273 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFSF9P41273 AP001148.1-201ENST00000624124 2359 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TNFSF9P41273 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF9P41273 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF9P41273 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF9P41273 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFSF9P41273 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFSF9P41273 RPL21P66-201ENST00000426566 466 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 OR2AS1P-201ENST00000427827 319 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF9P41273 AL590103.1-201ENST00000434488 307 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 FABP5P3-201ENST00000437960 408 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 AC093156.1-201ENST00000440382 670 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 AL135938.1-201ENST00000443141 297 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 RPS26P56-201ENST00000444468 240 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF9P41273 NF1P3-201ENST00000457709 450 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 RN7SL75P-201ENST00000461926 281 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 VN1R17P-201ENST00000472048 1090 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 RPS17P11-201ENST00000474297 293 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 KCTD9P5-201ENST00000504141 1170 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 RNU6-1073P-201ENST00000517182 106 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFSF9P41273 CYCSP39-201ENST00000565821 309 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFSF9P41273 RMST_10.1-201ENST00000616309 154 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.16□□□□□ -1.9
TNFSF9P41273 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF9P41273 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TNFSF9P41273 AL359893.1-201ENST00000447628 1580 ntBASIC3.16□□□□□ -1.9
TNFSF9P41273 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF9P41273 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF9P41273 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF9P41273 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF9P41273 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
TNFSF9P41273 AL672296.1-201ENST00000427780 2158 ntBASIC3.15□□□□□ -1.9
TNFSF9P41273 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFSF9P41273 AL355596.1-201ENST00000565399 3996 ntBASIC3.15□□□□□ -1.9
TNFSF9P41273 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TNFSF9P41273 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TNFSF9P41273 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TNFSF9P41273 SNORA5B-201ENST00000363786 132 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 RNU6-263P-201ENST00000363811 107 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TNFSF9P41273 MT-TC-201ENST00000387405 66 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 NPM1P10-201ENST00000398310 865 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 SSXP10-201ENST00000402595 565 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 MIR1289-1-201ENST00000408836 144 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 RNU4-78P-201ENST00000410940 126 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 RPL31P2-201ENST00000413849 377 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 AC007390.1-201ENST00000415722 356 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 RPS15AP6-201ENST00000420703 385 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 NEK4P1-201ENST00000433383 879 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 AC010881.1-201ENST00000433830 235 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 FTH1P1-201ENST00000437933 532 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.91
TNFSF9P41273 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFSF9P41273 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFSF9P41273 MTND2P3-201ENST00000452458 470 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 RNF138P1-201ENST00000502765 546 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF9P41273 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFSF9P41273 AC022509.4-201ENST00000621404 572 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF9P41273 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF9P41273 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF9P41273 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.15□□□□□ -1.91
TNFSF9P41273 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF9P41273 AC093831.2-201ENST00000624393 3427 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.91
TNFSF9P41273 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF9P41273 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF9P41273 ANKRD36P1-201ENST00000344424 659 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 RNU6-629P-201ENST00000384061 103 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 ATP5F1P6-201ENST00000402768 767 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AL592148.1-201ENST00000413568 445 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 PAICSP7-201ENST00000419829 962 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFSF9P41273 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFSF9P41273 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFSF9P41273 HMGB1P12-201ENST00000438594 598 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFSF9P41273 RPS15AP1-201ENST00000457423 391 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFSF9P41273 RPS27P23-201ENST00000487608 251 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.14□□□□□ -1.91
TNFSF9P41273 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
TNFSF9P41273 AC069306.1-201ENST00000507006 843 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFSF9P41273 AP004371.1-201ENST00000525240 214 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms