Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.38□□□□□ -1.71
CIITAP33076 KATNBL1P6-201ENST00000453433 915 ntBASIC4.38□□□□□ -1.71
CIITAP33076 RPL18AP17-201ENST00000455326 198 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.38□□□□□ -1.71
CIITAP33076 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.38□□□□□ -1.71
CIITAP33076 AL139099.1-201ENST00000497398 403 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AC104685.1-201ENST00000502445 371 ntBASIC4.38□□□□□ -1.71
CIITAP33076 DSTNP2-201ENST00000504533 515 ntBASIC4.38□□□□□ -1.71
CIITAP33076 HMGB1P28-201ENST00000507778 552 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.38□□□□□ -1.71
CIITAP33076 RNU6-202P-201ENST00000515998 96 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AP000790.1-201ENST00000528891 737 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AC135001.1-201ENST00000544546 283 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CIITAP33076 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.38□□□□□ -1.71
CIITAP33076 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.38□□□□□ -1.71
CIITAP33076 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.38□□□□□ -1.71
CIITAP33076 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.38□□□□□ -1.71
CIITAP33076 RNA5SP108-201ENST00000605921 117 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AC091946.2-201ENST00000606105 291 ntBASIC4.38□□□□□ -1.71
CIITAP33076 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CIITAP33076 OR11H5P-202ENST00000641612 1325 ntBASIC4.38□□□□□ -1.71
CIITAP33076 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CIITAP33076 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 MAPK10-253ENST00000641010 4072 ntBASIC4.37□□□□□ -1.71
CIITAP33076 CDR1-202ENST00000625883 1485 ntBASIC4.37□□□□□ -1.71
CIITAP33076 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.37□□□□□ -1.71
CIITAP33076 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CIITAP33076 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.37□□□□□ -1.71
CIITAP33076 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 RNU6-216P-201ENST00000363282 104 ntBASIC4.37□□□□□ -1.71
CIITAP33076 RNU6-115P-201ENST00000364310 107 ntBASIC4.37□□□□□ -1.71
CIITAP33076 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.37□□□□□ -1.71
CIITAP33076 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.37□□□□□ -1.71
CIITAP33076 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CIITAP33076 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.37□□□□□ -1.71
CIITAP33076 Y_RNA.553-201ENST00000384670 102 ntBASIC4.37□□□□□ -1.71
CIITAP33076 RNU6-253P-201ENST00000384730 105 ntBASIC4.37□□□□□ -1.71
CIITAP33076 RN7SKP159-201ENST00000410657 292 ntBASIC4.37□□□□□ -1.71
CIITAP33076 RNA5SP39-201ENST00000411245 120 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AC069218.2-201ENST00000411665 344 ntBASIC4.37□□□□□ -1.71
CIITAP33076 NANOGP6-201ENST00000429190 847 ntBASIC4.37□□□□□ -1.71
CIITAP33076 IFNNP1-201ENST00000429219 553 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.37□□□□□ -1.71
CIITAP33076 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.37□□□□□ -1.71
CIITAP33076 LARP1BP3-201ENST00000437229 869 ntBASIC4.37□□□□□ -1.71
CIITAP33076 RPS24P1-201ENST00000438550 371 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.37□□□□□ -1.71
CIITAP33076 MTCO1P19-201ENST00000443487 500 ntBASIC4.37□□□□□ -1.71
CIITAP33076 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 NANOGP10-201ENST00000453325 895 ntBASIC4.37□□□□□ -1.71
CIITAP33076 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.37□□□□□ -1.71
CIITAP33076 MTND4P2-201ENST00000507767 1203 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AC093281.2-201ENST00000510153 597 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AC018797.3-201ENST00000513388 1241 ntBASIC4.37□□□□□ -1.71
CIITAP33076 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 AC027309.2-201ENST00000520566 192 ntBASIC4.37□□□□□ -1.71
CIITAP33076 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.37□□□□□ -1.71
CIITAP33076 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.37□□□□□ -1.71
CIITAP33076 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.37□□□□□ -1.71
CIITAP33076 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.37□□□□□ -1.71
CIITAP33076 AC093519.1-201ENST00000566109 298 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AGGF1P4-201ENST00000568249 801 ntBASIC4.37□□□□□ -1.71
CIITAP33076 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 AC020914.6-201ENST00000594327 272 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AC009509.4-201ENST00000619202 509 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AC026585.1-201ENST00000619582 524 ntBASIC4.37□□□□□ -1.71
CIITAP33076 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.37□□□□□ -1.71
CIITAP33076 AC090582.1-201ENST00000636321 199 ntBASIC4.37□□□□□ -1.71
CIITAP33076 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CIITAP33076 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CIITAP33076 PNPT1P2-201ENST00000456768 2050 ntBASIC4.37□□□□□ -1.71
CIITAP33076 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CIITAP33076 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.36□□□□□ -1.71
CIITAP33076 MAPK10-372ENST00000641954 3413 ntBASIC4.36□□□□□ -1.71
CIITAP33076 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.36□□□□□ -1.71
CIITAP33076 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CIITAP33076 MTND5P24-201ENST00000438892 1767 ntBASIC4.36□□□□□ -1.71
CIITAP33076 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.36□□□□□ -1.71
CIITAP33076 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CIITAP33076 RNA5SP502-201ENST00000362694 119 ntBASIC4.36□□□□□ -1.71
CIITAP33076 U3.4-201ENST00000363352 213 ntBASIC4.36□□□□□ -1.71
CIITAP33076 MIR124-3-201ENST00000384866 87 ntBASIC4.36□□□□□ -1.71
CIITAP33076 MIR153-1-201ENST00000384914 90 ntBASIC4.36□□□□□ -1.71
CIITAP33076 BTBD10P2-201ENST00000404779 676 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AL355379.1-201ENST00000405542 640 ntBASIC4.36□□□□□ -1.71
CIITAP33076 MIR1284-201ENST00000408337 120 ntBASIC4.36□□□□□ -1.71
CIITAP33076 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.36□□□□□ -1.71
CIITAP33076 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.36□□□□□ -1.71
CIITAP33076 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.36□□□□□ -1.71
CIITAP33076 AC233981.1-201ENST00000423224 461 ntBASIC4.36□□□□□ -1.71
CIITAP33076 RPL7P2-201ENST00000427639 268 ntBASIC4.36□□□□□ -1.71
CIITAP33076 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms