Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 HMGN2P5-201ENST00000436882 273 ntBASIC3.68□□□□□ -1.82
CLIP1P30622 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP1P30622 AL645939.1-201ENST00000453429 797 ntBASIC3.68□□□□□ -1.82
CLIP1P30622 RPL23AP62-201ENST00000463396 453 ntBASIC3.68□□□□□ -1.82
CLIP1P30622 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP1P30622 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP1P30622 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP1P30622 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.68□□□□□ -1.82
CLIP1P30622 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP1P30622 MIR6766-201ENST00000622641 72 ntBASIC3.68□□□□□ -1.82
CLIP1P30622 AL160394.1-201ENST00000624765 724 ntBASIC3.68□□□□□ -1.82
CLIP1P30622 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP1P30622 SNORD114-1-201ENST00000362705 72 ntBASIC3.67□□□□□ -1.82
CLIP1P30622 U8.8-201ENST00000365399 135 ntBASIC3.67□□□□□ -1.82
CLIP1P30622 DEFA7P-201ENST00000382676 285 ntBASIC3.67□□□□□ -1.82
CLIP1P30622 MIR1289-2-201ENST00000408360 111 ntBASIC3.67□□□□□ -1.82
CLIP1P30622 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP1P30622 AC099063.2-201ENST00000446360 662 ntBASIC3.67□□□□□ -1.82
CLIP1P30622 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CLIP1P30622 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP1P30622 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP1P30622 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP1P30622 DEFB122-202ENST00000569013 197 ntBASIC3.67□□□□□ -1.82
CLIP1P30622 RPS24P8-201ENST00000431490 402 ntBASIC3.66□□□□□ -1.82
CLIP1P30622 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.66□□□□□ -1.82
CLIP1P30622 XKRY-201ENST00000510392 1100 ntBASIC3.66□□□□□ -1.82
CLIP1P30622 AC008716.1-201ENST00000511084 513 ntBASIC3.66□□□□□ -1.82
CLIP1P30622 IGKV2-36-201ENST00000519999 223 ntBASIC3.66□□□□□ -1.82
CLIP1P30622 AP001317.1-201ENST00000531194 960 ntBASIC3.66□□□□□ -1.82
CLIP1P30622 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.66□□□□□ -1.82
CLIP1P30622 AC074029.1-201ENST00000552531 1044 ntBASIC3.66□□□□□ -1.82
CLIP1P30622 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.66□□□□□ -1.82
CLIP1P30622 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.66□□□□□ -1.82
CLIP1P30622 AC097714.1-201ENST00000511272 1647 ntBASIC3.66□□□□□ -1.82
CLIP1P30622 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLIP1P30622 SAR1AP4-201ENST00000429225 591 ntBASIC3.65□□□□□ -1.83
CLIP1P30622 USP9YP7-201ENST00000436723 430 ntBASIC3.65□□□□□ -1.83
CLIP1P30622 USP9YP32-201ENST00000452432 430 ntBASIC3.65□□□□□ -1.83
CLIP1P30622 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.65□□□□□ -1.83
CLIP1P30622 Z99496.1-201ENST00000469424 1477 ntBASIC3.65□□□□□ -1.83
CLIP1P30622 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.65□□□□□ -1.83
CLIP1P30622 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLIP1P30622 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.65□□□□□ -1.83
CLIP1P30622 AC026464.5-201ENST00000562497 722 ntBASIC3.65□□□□□ -1.83
CLIP1P30622 NF1P5-201ENST00000588287 448 ntBASIC3.65□□□□□ -1.83
CLIP1P30622 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.65□□□□□ -1.83
CLIP1P30622 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CLIP1P30622 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
CLIP1P30622 AC103798.2-201ENST00000624292 632 ntBASIC3.65□□□□□ -1.83
CLIP1P30622 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.65□□□□□ -1.83
CLIP1P30622 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP1P30622 AC104454.1-201ENST00000421341 1401 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CLIP1P30622 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP1P30622 RAP1BP1-201ENST00000412709 553 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 AC107081.1-201ENST00000414975 361 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 AL138785.1-201ENST00000425821 331 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 AL138787.1-202ENST00000437804 898 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP1P30622 RN7SL499P-201ENST00000481141 276 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 AC108860.1-201ENST00000484521 383 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 RPL9P6-201ENST00000492764 598 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 RPL23AP49-201ENST00000492925 468 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP1P30622 AC112673.1-201ENST00000513168 575 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP1P30622 OR5BN1P-201ENST00000532955 829 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP1P30622 AC004696.1-201ENST00000614345 607 ntBASIC3.64□□□□□ -1.83
CLIP1P30622 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLIP1P30622 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLIP1P30622 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP1P30622 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP1P30622 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.63□□□□□ -1.83
CLIP1P30622 AL590103.1-201ENST00000434488 307 ntBASIC3.63□□□□□ -1.83
CLIP1P30622 IFNA11P-201ENST00000446352 526 ntBASIC3.63□□□□□ -1.83
CLIP1P30622 RPS27AP9-201ENST00000477681 438 ntBASIC3.63□□□□□ -1.83
CLIP1P30622 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.63□□□□□ -1.83
CLIP1P30622 MTCYBP20-201ENST00000524239 1129 ntBASIC3.63□□□□□ -1.83
CLIP1P30622 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP1P30622 AL136981.2-201ENST00000617319 734 ntBASIC3.63□□□□□ -1.83
CLIP1P30622 CYP3A51P-201ENST00000633513 256 ntBASIC3.63□□□□□ -1.83
CLIP1P30622 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP1P30622 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP1P30622 RNU1-91P-201ENST00000364746 163 ntBASIC3.62□□□□□ -1.83
CLIP1P30622 CFTRP1-201ENST00000456646 183 ntBASIC3.62□□□□□ -1.83
CLIP1P30622 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.62□□□□□ -1.83
CLIP1P30622 AC105137.2-201ENST00000569073 466 ntBASIC3.62□□□□□ -1.83
CLIP1P30622 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.62□□□□□ -1.83
CLIP1P30622 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.62□□□□□ -1.83
CLIP1P30622 MIR6873-201ENST00000622788 63 ntBASIC3.62□□□□□ -1.83
CLIP1P30622 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.62□□□□□ -1.83
CLIP1P30622 RNU6-253P-201ENST00000384730 105 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP1P30622 MTATP6P11-201ENST00000428071 670 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.61□□□□□ -1.83
CLIP1P30622 AC013410.1-201ENST00000436223 1232 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP1P30622 AL354710.1-201ENST00000453641 246 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 RANP3-201ENST00000530970 276 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms