Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MIR6748-201ENST00000610433 71 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 MIR378J-201ENST00000611988 109 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AL157817.1-201ENST00000614264 790 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC008083.4-201ENST00000615076 444 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMAP28067 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMAP28067 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMAP28067 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMAP28067 ENSAP3-201ENST00000312710 333 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMAP28067 RNA5SP27-201ENST00000363839 119 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 SNORA1.3-201ENST00000384676 136 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 RPL21P17-201ENST00000397467 475 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 FAT1P1-201ENST00000406588 507 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 RNU6-272P-201ENST00000411028 104 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 RNA5SP492-201ENST00000411330 114 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC008280.1-201ENST00000418851 412 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 KCTD10P1-201ENST00000434203 625 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 RPL36AP6-201ENST00000435770 321 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMAP28067 AL590664.1-201ENST00000448065 339 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMAP28067 RPL30P14-201ENST00000482744 348 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 RPL32P34-201ENST00000486380 400 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 RPL7P38-201ENST00000488396 739 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 NPM1P41-201ENST00000512920 831 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 SETP12-201ENST00000514068 805 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 ELOCP31-201ENST00000540463 467 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 SETP2-201ENST00000553886 926 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 ZNF92P2-201ENST00000600543 1059 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC106791.2-201ENST00000604680 391 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC005972.3-201ENST00000606304 481 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DMAP28067 AL162574.2-201ENST00000614618 657 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC024595.1-201ENST00000623088 387 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC092608.3-201ENST00000625017 386 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AL590396.2-201ENST00000636511 1041 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 AC099654.7-201ENST00000635788 2127 ntBASIC2.68□□□□□ -1.98
HLA-DMAP28067 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DMAP28067 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 RNA5SP139-201ENST00000364340 117 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 RNU6-650P-201ENST00000365658 111 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AL359837.1-201ENST00000381357 287 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 MIR141-201ENST00000384975 95 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DMAP28067 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 RNU4-27P-201ENST00000410889 139 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 TATDN1P1-201ENST00000414123 891 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 VN1R42P-201ENST00000424651 344 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC096632.1-201ENST00000427395 310 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC073063.1-201ENST00000434352 607 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 AL512661.1-201ENST00000434586 1253 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 ELOCP3-201ENST00000439303 348 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 Z96811.1-201ENST00000445880 108 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 CYCSP35-201ENST00000451978 304 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 DNAJC19P8-201ENST00000452887 259 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC104619.4-201ENST00000510773 249 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC004486.1-201ENST00000546846 233 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 SNRPGP1-201ENST00000553864 222 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC027104.1-201ENST00000563702 681 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DMAP28067 AL590392.1-201ENST00000604960 446 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 KATNBL1P5-201ENST00000605015 517 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.67□□□□□ -1.98
HLA-DMAP28067 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DMAP28067 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DMAP28067 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms