Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC011712.1-201ENST00000588959 234 ntBASIC4.51□□□□□ -1.69
CD40P25942 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.51□□□□□ -1.69
CD40P25942 AL117336.2-201ENST00000602435 335 ntBASIC4.51□□□□□ -1.69
CD40P25942 AC008814.1-201ENST00000603797 406 ntBASIC4.51□□□□□ -1.69
CD40P25942 AL034351.1-201ENST00000605288 668 ntBASIC4.51□□□□□ -1.69
CD40P25942 HMGN2P28-201ENST00000606102 262 ntBASIC4.51□□□□□ -1.69
CD40P25942 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.51□□□□□ -1.69
CD40P25942 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.51□□□□□ -1.69
CD40P25942 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CD40P25942 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.51□□□□□ -1.69
CD40P25942 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
CD40P25942 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.51□□□□□ -1.69
CD40P25942 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CD40P25942 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CD40P25942 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.51□□□□□ -1.69
CD40P25942 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CD40P25942 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CD40P25942 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CD40P25942 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CD40P25942 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.5□□□□□ -1.69
CD40P25942 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CD40P25942 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CD40P25942 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CD40P25942 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
CD40P25942 SNURFL-201ENST00000309296 343 ntBASIC4.5□□□□□ -1.69
CD40P25942 RNU5E-6P-201ENST00000365574 115 ntBASIC4.5□□□□□ -1.69
CD40P25942 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CD40P25942 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CD40P25942 AL583834.1-201ENST00000406943 343 ntBASIC4.5□□□□□ -1.69
CD40P25942 RN7SKP125-201ENST00000410481 302 ntBASIC4.5□□□□□ -1.69
CD40P25942 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.5□□□□□ -1.69
CD40P25942 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.5□□□□□ -1.69
CD40P25942 RPL12P3-201ENST00000440080 396 ntBASIC4.5□□□□□ -1.69
CD40P25942 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CD40P25942 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.5□□□□□ -1.69
CD40P25942 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.5□□□□□ -1.69
CD40P25942 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.5□□□□□ -1.69
CD40P25942 RNU7-182P-201ENST00000459009 62 ntBASIC4.5□□□□□ -1.69
CD40P25942 AC008481.1-201ENST00000463278 396 ntBASIC4.5□□□□□ -1.69
CD40P25942 AC090686.1-201ENST00000481577 749 ntBASIC4.5□□□□□ -1.69
CD40P25942 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CD40P25942 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.5□□□□□ -1.69
CD40P25942 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.5□□□□□ -1.69
CD40P25942 AC004980.4-201ENST00000513375 203 ntBASIC4.5□□□□□ -1.69
CD40P25942 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.5□□□□□ -1.69
CD40P25942 AC105417.1-201ENST00000514691 285 ntBASIC4.5□□□□□ -1.69
CD40P25942 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.5□□□□□ -1.69
CD40P25942 RN7SKP147-201ENST00000517154 244 ntBASIC4.5□□□□□ -1.69
CD40P25942 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.5□□□□□ -1.69
CD40P25942 OR5AL2P-201ENST00000532185 920 ntBASIC4.5□□□□□ -1.69
CD40P25942 OR5B10P-201ENST00000532869 642 ntBASIC4.5□□□□□ -1.69
CD40P25942 AC125611.2-201ENST00000551907 647 ntBASIC4.5□□□□□ -1.69
CD40P25942 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.5□□□□□ -1.69
CD40P25942 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.5□□□□□ -1.69
CD40P25942 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.5□□□□□ -1.69
CD40P25942 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CD40P25942 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.5□□□□□ -1.69
CD40P25942 TUG1_2.1-201ENST00000614234 87 ntBASIC4.5□□□□□ -1.69
CD40P25942 AC243312.2-201ENST00000623340 601 ntBASIC4.5□□□□□ -1.69
CD40P25942 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CD40P25942 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CD40P25942 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CD40P25942 DDX10P1-201ENST00000448545 1933 ntBASIC4.5□□□□□ -1.69
CD40P25942 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CD40P25942 OR4G1P-203ENST00000641984 1631 ntBASIC4.5□□□□□ -1.69
CD40P25942 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CD40P25942 ASNSP3-201ENST00000451989 1306 ntBASIC4.49□□□□□ -1.69
CD40P25942 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.49□□□□□ -1.69
CD40P25942 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.49□□□□□ -1.69
CD40P25942 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.49□□□□□ -1.69
CD40P25942 AC073343.1-201ENST00000328239 651 ntBASIC4.49□□□□□ -1.69
CD40P25942 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 DDX39BP1-205ENST00000422507 192 ntBASIC4.49□□□□□ -1.69
CD40P25942 AC018630.2-202ENST00000422992 927 ntBASIC4.49□□□□□ -1.69
CD40P25942 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.49□□□□□ -1.69
CD40P25942 OR2AH1P-201ENST00000425717 928 ntBASIC4.49□□□□□ -1.69
CD40P25942 AC093106.2-201ENST00000428212 385 ntBASIC4.49□□□□□ -1.69
CD40P25942 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.49□□□□□ -1.69
CD40P25942 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.49□□□□□ -1.69
CD40P25942 AC093019.1-201ENST00000443135 252 ntBASIC4.49□□□□□ -1.69
CD40P25942 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.49□□□□□ -1.69
CD40P25942 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.49□□□□□ -1.69
CD40P25942 CBWD4P-201ENST00000445695 655 ntBASIC4.49□□□□□ -1.69
CD40P25942 AL162389.1-201ENST00000449233 177 ntBASIC4.49□□□□□ -1.69
CD40P25942 ELOCP23-201ENST00000452014 332 ntBASIC4.49□□□□□ -1.69
CD40P25942 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD40P25942 SNORD97-201ENST00000459187 142 ntBASIC4.49□□□□□ -1.69
CD40P25942 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.49□□□□□ -1.69
CD40P25942 RN7SKP260-201ENST00000516907 149 ntBASIC4.49□□□□□ -1.69
CD40P25942 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.49□□□□□ -1.69
CD40P25942 SUMO2P20-201ENST00000520803 283 ntBASIC4.49□□□□□ -1.69
CD40P25942 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.49□□□□□ -1.69
CD40P25942 AP000676.2-201ENST00000529711 301 ntBASIC4.49□□□□□ -1.69
CD40P25942 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms