Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC113412.1-201ENST00000425840 504 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 AL662874.1-201ENST00000426065 230 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 RSL24D1P6-201ENST00000426934 401 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 RPS20P21-201ENST00000466859 343 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 RN7SL583P-201ENST00000475692 287 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 AC092451.1-201ENST00000480211 153 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.68□□□□□ -1.5
NFKB1P19838 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.68□□□□□ -1.5
NFKB1P19838 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.68□□□□□ -1.5
NFKB1P19838 Y_RNA.708-201ENST00000516950 96 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 SNORA43.3-201ENST00000517240 103 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.68□□□□□ -1.5
NFKB1P19838 AP000827.1-201ENST00000527814 258 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 GNAI2P1-201ENST00000541815 315 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.68□□□□□ -1.5
NFKB1P19838 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NFKB1P19838 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.68□□□□□ -1.5
NFKB1P19838 AC009229.3-201ENST00000608056 282 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 AC025574.2-201ENST00000615621 514 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 U2.1-201ENST00000618978 145 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.68□□□□□ -1.5
NFKB1P19838 AL445363.3-201ENST00000623080 671 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.68□□□□□ -1.5
NFKB1P19838 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NFKB1P19838 AC005592.1-201ENST00000566527 1640 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NFKB1P19838 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NFKB1P19838 AC006206.1-201ENST00000544842 3387 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.67□□□□□ -1.5
NFKB1P19838 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.67□□□□□ -1.5
NFKB1P19838 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NFKB1P19838 RNU6-562P-201ENST00000362731 107 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 RNA5SP219-201ENST00000390940 113 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 RNU2-22P-201ENST00000411266 212 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 AC114491.1-201ENST00000416095 246 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 CYCSP51-201ENST00000443545 318 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.67□□□□□ -1.5
NFKB1P19838 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 AC104806.1-201ENST00000508720 308 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 RNU6-699P-201ENST00000517081 110 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 FAM60DP-201ENST00000524174 632 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 AL133153.1-201ENST00000557756 303 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.67□□□□□ -1.5
NFKB1P19838 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.67□□□□□ -1.5
NFKB1P19838 MIR6128-201ENST00000615528 109 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 AL136313.1-201ENST00000624804 202 ntBASIC5.67□□□□□ -1.5
NFKB1P19838 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.67□□□□□ -1.5
NFKB1P19838 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.67□□□□□ -1.5
NFKB1P19838 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NFKB1P19838 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NFKB1P19838 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NFKB1P19838 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.66□□□□□ -1.5
NFKB1P19838 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.66□□□□□ -1.5
NFKB1P19838 AC007938.2-201ENST00000604666 2634 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NFKB1P19838 AC020633.1-201ENST00000468439 2247 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.66□□□□□ -1.5
NFKB1P19838 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NFKB1P19838 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
NFKB1P19838 RNU6-490P-201ENST00000362985 107 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 RNU1-115P-201ENST00000365329 160 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 RNU6-209P-201ENST00000384118 107 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 RNU6-550P-201ENST00000391057 101 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 RNU6-1109P-201ENST00000391187 107 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 AL358176.3-201ENST00000420757 454 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 AC105402.2-201ENST00000438503 358 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 RPS15AP27-201ENST00000449183 343 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 HMGB3P21-201ENST00000452483 547 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 AZGP1P2-201ENST00000454506 345 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 SCARNA18-201ENST00000459004 134 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NFKB1P19838 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.66□□□□□ -1.5
NFKB1P19838 RPL22P13-201ENST00000493291 347 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 HIGD1AP14-201ENST00000507617 282 ntBASIC5.66□□□□□ -1.5
NFKB1P19838 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.66□□□□□ -1.5
NFKB1P19838 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms