Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT3P12035 AL133547.1-201ENST00000448546 220 ntBASIC3.66□□□□□ -1.82
KRT3P12035 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT3P12035 AC007967.1-201ENST00000455422 1159 ntBASIC3.66□□□□□ -1.82
KRT3P12035 RPL7P15-201ENST00000461190 712 ntBASIC3.66□□□□□ -1.82
KRT3P12035 PLGLA-201ENST00000465668 449 ntBASIC3.66□□□□□ -1.82
KRT3P12035 RN7SL542P-201ENST00000467147 294 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AC092757.1-201ENST00000467293 467 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AC106707.2-201ENST00000484182 374 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT3P12035 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT3P12035 PCBP2P3-201ENST00000509726 843 ntBASIC3.66□□□□□ -1.82
KRT3P12035 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRT3P12035 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT3P12035 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT3P12035 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT3P12035 TRMT10BP1-201ENST00000519377 943 ntBASIC3.66□□□□□ -1.82
KRT3P12035 MTCO1P49-201ENST00000523429 802 ntBASIC3.66□□□□□ -1.82
KRT3P12035 HIGD1AP10-201ENST00000527837 282 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AP000790.1-201ENST00000528891 737 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.66□□□□□ -1.82
KRT3P12035 TGIF1P1-201ENST00000558095 802 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AADACP1-206ENST00000561502 1193 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT3P12035 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT3P12035 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT3P12035 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT3P12035 AL390838.2-201ENST00000602394 274 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT3P12035 AL035411.2-201ENST00000604022 421 ntBASIC3.66□□□□□ -1.82
KRT3P12035 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT3P12035 AC106052.1-201ENST00000608029 497 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AL356863.1-201ENST00000623378 1080 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AC026634.1-201ENST00000634369 198 ntBASIC3.66□□□□□ -1.82
KRT3P12035 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT3P12035 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
KRT3P12035 MIR7153-201ENST00000637758 57 ntBASIC3.66□□□□□ -1.82
KRT3P12035 AC009093.8-201ENST00000641769 292 ntBASIC3.66□□□□□ -1.82
KRT3P12035 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT3P12035 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT3P12035 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT3P12035 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.82
KRT3P12035 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.65□□□□□ -1.82
KRT3P12035 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.65□□□□□ -1.82
KRT3P12035 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRT3P12035 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KRT3P12035 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.65□□□□□ -1.82
KRT3P12035 AL365440.1-201ENST00000436135 2167 ntBASIC3.65□□□□□ -1.82
KRT3P12035 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KRT3P12035 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
KRT3P12035 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.65□□□□□ -1.82
KRT3P12035 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KRT3P12035 Y_RNA.25-201ENST00000362528 102 ntBASIC3.65□□□□□ -1.83
KRT3P12035 RNU6-251P-201ENST00000363235 104 ntBASIC3.65□□□□□ -1.83
KRT3P12035 RNU5D-1-201ENST00000363299 116 ntBASIC3.65□□□□□ -1.83
KRT3P12035 RNU6-263P-201ENST00000363811 107 ntBASIC3.65□□□□□ -1.83
KRT3P12035 Y_RNA.493-201ENST00000384422 102 ntBASIC3.65□□□□□ -1.83
KRT3P12035 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT3P12035 SNRPEP2-201ENST00000397592 279 ntBASIC3.65□□□□□ -1.83
KRT3P12035 EI24P2-201ENST00000397776 1076 ntBASIC3.65□□□□□ -1.83
KRT3P12035 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.65□□□□□ -1.83
KRT3P12035 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT3P12035 RPL31P54-201ENST00000429803 370 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.65□□□□□ -1.83
KRT3P12035 NEK4P1-201ENST00000433383 879 ntBASIC3.65□□□□□ -1.83
KRT3P12035 KCTD10P1-201ENST00000434203 625 ntBASIC3.65□□□□□ -1.83
KRT3P12035 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT3P12035 RPL23AP76-201ENST00000441860 458 ntBASIC3.65□□□□□ -1.83
KRT3P12035 TXNP1-201ENST00000441872 371 ntBASIC3.65□□□□□ -1.83
KRT3P12035 RPL21P133-201ENST00000443666 476 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC007327.1-201ENST00000447461 264 ntBASIC3.65□□□□□ -1.83
KRT3P12035 MTCO1P48-201ENST00000448024 1096 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC104073.1-201ENST00000451988 151 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC020898.1-201ENST00000474167 787 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC134050.1-201ENST00000495088 933 ntBASIC3.65□□□□□ -1.83
KRT3P12035 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
KRT3P12035 MTCYBP37-201ENST00000510642 1133 ntBASIC3.65□□□□□ -1.83
KRT3P12035 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT3P12035 RN7SKP13-201ENST00000515933 244 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC023632.4-201ENST00000517783 191 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT3P12035 OR4R3P-201ENST00000525084 838 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC103843.2-201ENST00000530523 682 ntBASIC3.65□□□□□ -1.83
KRT3P12035 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT3P12035 SYF2P1-201ENST00000550658 413 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AL389895.1-201ENST00000554127 252 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.65□□□□□ -1.83
KRT3P12035 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.65□□□□□ -1.83
KRT3P12035 MIR4425-201ENST00000580572 84 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC069545.1-201ENST00000605671 358 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC005332.6-201ENST00000613178 446 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC013470.4-201ENST00000619978 986 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC039056.2-201ENST00000622261 511 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AL034408.1-202ENST00000636088 415 ntBASIC3.65□□□□□ -1.83
KRT3P12035 AC109315.1-201ENST00000584143 1347 ntBASIC3.65□□□□□ -1.83
KRT3P12035 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT3P12035 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
KRT3P12035 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
KRT3P12035 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRT3P12035 SNORA7.2-201ENST00000364446 145 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms