Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP1P11387 AL357078.2-201ENST00000416486 427 ntBASIC3.64□□□□□ -1.83
TOP1P11387 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP1P11387 MTND4P15-201ENST00000437913 1033 ntBASIC3.64□□□□□ -1.83
TOP1P11387 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP1P11387 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.64□□□□□ -1.83
TOP1P11387 AC016696.1-201ENST00000446949 318 ntBASIC3.64□□□□□ -1.83
TOP1P11387 RPL23AP23-201ENST00000452590 471 ntBASIC3.64□□□□□ -1.83
TOP1P11387 CABYRP1-201ENST00000465493 1045 ntBASIC3.64□□□□□ -1.83
TOP1P11387 SETP6-201ENST00000479329 568 ntBASIC3.64□□□□□ -1.83
TOP1P11387 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP1P11387 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TOP1P11387 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP1P11387 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.64□□□□□ -1.83
TOP1P11387 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.64□□□□□ -1.83
TOP1P11387 RNA5SP341-201ENST00000516261 117 ntBASIC3.64□□□□□ -1.83
TOP1P11387 AP001207.2-201ENST00000519490 539 ntBASIC3.64□□□□□ -1.83
TOP1P11387 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP1P11387 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP1P11387 AP003385.6-201ENST00000531603 374 ntBASIC3.64□□□□□ -1.83
TOP1P11387 TRAV37-201ENST00000553906 342 ntBASIC3.64□□□□□ -1.83
TOP1P11387 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP1P11387 AC025918.2-201ENST00000558683 763 ntBASIC3.64□□□□□ -1.83
TOP1P11387 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.64□□□□□ -1.83
TOP1P11387 AC092474.3-201ENST00000603022 568 ntBASIC3.64□□□□□ -1.83
TOP1P11387 AL109653.1-201ENST00000603091 248 ntBASIC3.64□□□□□ -1.83
TOP1P11387 AC113368.1-201ENST00000603736 382 ntBASIC3.64□□□□□ -1.83
TOP1P11387 AC092574.1-201ENST00000609771 420 ntBASIC3.64□□□□□ -1.83
TOP1P11387 VIS1.1-201ENST00000610517 203 ntBASIC3.64□□□□□ -1.83
TOP1P11387 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP1P11387 AC091948.2-201ENST00000636510 279 ntBASIC3.64□□□□□ -1.83
TOP1P11387 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TOP1P11387 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.64□□□□□ -1.83
TOP1P11387 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.63□□□□□ -1.83
TOP1P11387 MTCO1P18-201ENST00000455518 1419 ntBASIC3.63□□□□□ -1.83
TOP1P11387 RNU4-65P-201ENST00000410473 140 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.63□□□□□ -1.83
TOP1P11387 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP1P11387 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP1P11387 HIGD1AP11-201ENST00000438361 280 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AL691517.1-201ENST00000440833 1235 ntBASIC3.63□□□□□ -1.83
TOP1P11387 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.63□□□□□ -1.83
TOP1P11387 HMGB1P15-201ENST00000453854 435 ntBASIC3.63□□□□□ -1.83
TOP1P11387 S100A11P2-201ENST00000467589 312 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AC010285.1-201ENST00000470580 392 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AC015724.1-201ENST00000478577 156 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AC092185.1-201ENST00000491371 97 ntBASIC3.63□□□□□ -1.83
TOP1P11387 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP1P11387 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.63□□□□□ -1.83
TOP1P11387 RNU6-467P-201ENST00000517027 110 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP1P11387 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.63□□□□□ -1.83
TOP1P11387 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.63□□□□□ -1.83
TOP1P11387 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.63□□□□□ -1.83
TOP1P11387 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP1P11387 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP1P11387 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.63□□□□□ -1.83
TOP1P11387 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.63□□□□□ -1.83
TOP1P11387 AL365400.2-201ENST00000605604 902 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AL162274.2-201ENST00000614406 332 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.63□□□□□ -1.83
TOP1P11387 AL356118.1-201ENST00000635272 1078 ntBASIC3.63□□□□□ -1.83
TOP1P11387 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.63□□□□□ -1.83
TOP1P11387 MTND5P27-201ENST00000428871 1720 ntBASIC3.63□□□□□ -1.83
TOP1P11387 AL355578.1-201ENST00000607405 1328 ntBASIC3.63□□□□□ -1.83
TOP1P11387 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.62□□□□□ -1.83
TOP1P11387 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.62□□□□□ -1.83
TOP1P11387 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.62□□□□□ -1.83
TOP1P11387 RPL23AP57-201ENST00000332361 466 ntBASIC3.62□□□□□ -1.83
TOP1P11387 U3.6-201ENST00000363622 211 ntBASIC3.62□□□□□ -1.83
TOP1P11387 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TOP1P11387 SNORA54-201ENST00000384281 123 ntBASIC3.62□□□□□ -1.83
TOP1P11387 RNA5SP56-201ENST00000410277 118 ntBASIC3.62□□□□□ -1.83
TOP1P11387 RN7SKP220-201ENST00000410611 288 ntBASIC3.62□□□□□ -1.83
TOP1P11387 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.62□□□□□ -1.83
TOP1P11387 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TOP1P11387 AC005189.1-201ENST00000431286 310 ntBASIC3.62□□□□□ -1.83
TOP1P11387 MTND4LP7-201ENST00000431728 294 ntBASIC3.62□□□□□ -1.83
TOP1P11387 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.62□□□□□ -1.83
TOP1P11387 AC093278.1-201ENST00000494700 600 ntBASIC3.62□□□□□ -1.83
TOP1P11387 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.62□□□□□ -1.83
TOP1P11387 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.62□□□□□ -1.83
TOP1P11387 SNORA31.20-201ENST00000517111 133 ntBASIC3.62□□□□□ -1.83
TOP1P11387 RNA5SP380-201ENST00000517190 98 ntBASIC3.62□□□□□ -1.83
TOP1P11387 AC092470.1-201ENST00000546187 132 ntBASIC3.62□□□□□ -1.83
TOP1P11387 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.62□□□□□ -1.83
TOP1P11387 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.62□□□□□ -1.83
TOP1P11387 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.62□□□□□ -1.83
TOP1P11387 AC040174.2-201ENST00000602701 465 ntBASIC3.62□□□□□ -1.83
TOP1P11387 AL591516.1-201ENST00000611326 274 ntBASIC3.62□□□□□ -1.83
TOP1P11387 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TOP1P11387 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.62□□□□□ -1.83
TOP1P11387 AP000720.1-201ENST00000625091 483 ntBASIC3.62□□□□□ -1.83
TOP1P11387 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TOP1P11387 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.62□□□□□ -1.83
TOP1P11387 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.61□□□□□ -1.83
TOP1P11387 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP1P11387 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP1P11387 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP1P11387 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms