Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC010525.2-201ENST00000590920 195 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AC004908.2-201ENST00000609090 574 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AL355472.4-201ENST00000610233 626 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AL356585.4-201ENST00000623078 1229 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 OR9K1P-202ENST00000641111 3217 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 RNU6-223P-201ENST00000362830 107 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 RNU6-639P-201ENST00000384074 107 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 SNORA70.9-201ENST00000384370 135 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 RPL23AP32-201ENST00000395315 459 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 RNU2-21P-201ENST00000410368 188 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 RN7SKP100-201ENST00000411258 284 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC078974.1-201ENST00000411597 223 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 NDUFB4P5-201ENST00000415445 361 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 RPS26P47-201ENST00000427219 348 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 ARL2BPP10-201ENST00000446487 531 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AL583843.1-201ENST00000456070 346 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 PPIAP21-201ENST00000464473 501 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 MRPS17P3-201ENST00000465453 385 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC005741.1-201ENST00000511094 432 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC123904.2-201ENST00000548059 300 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC124068.1-201ENST00000563131 678 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC099489.2-201ENST00000574976 260 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 MIR3149-201ENST00000584629 83 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC020910.3-201ENST00000603701 874 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 BX664608.1-201ENST00000610519 487 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AC040168.1-201ENST00000623594 991 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 AL445437.1-201ENST00000623157 3087 ntBASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.72□□□□□ -1.33
CSB-PGBD3P0DP91 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CSB-PGBD3P0DP91 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CSB-PGBD3P0DP91 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 RPL7P26-201ENST00000333817 754 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 Y_RNA.231-201ENST00000364358 102 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 SNORA22B-201ENST00000383876 138 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 Y_RNA.445-201ENST00000384168 102 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC012065.2-201ENST00000421295 375 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AL591212.2-201ENST00000433923 257 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 CEACAMP1-201ENST00000434624 1035 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AP1S2P1-201ENST00000457344 379 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 RNU6-261P-201ENST00000459506 102 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 RN7SL809P-201ENST00000482040 297 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 RNU4-49P-201ENST00000516080 140 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 RN7SKP276-201ENST00000516242 268 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 SNORA40.12-201ENST00000516329 111 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 Vault.3-201ENST00000516676 95 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 RN7SKP92-201ENST00000517266 244 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 PARP1P2-201ENST00000556806 195 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC115621.1-201ENST00000604653 858 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC121334.2-201ENST00000605387 271 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AL080274.1-201ENST00000605565 220 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC087588.2-201ENST00000617667 426 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC015813.6-201ENST00000624409 5808 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 AC027228.2-201ENST00000567141 2154 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms