Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.21□□□□□ -1.74
MMP3P08254 DEFB109D-201ENST00000529497 240 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.21□□□□□ -1.74
MMP3P08254 OR7K1P-201ENST00000546439 926 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AC007115.1-201ENST00000546853 234 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 AC023161.2-201ENST00000551218 780 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.21□□□□□ -1.74
MMP3P08254 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.21□□□□□ -1.74
MMP3P08254 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 AL160281.1-201ENST00000605307 311 ntBASIC4.21□□□□□ -1.74
MMP3P08254 SNORA62.6-201ENST00000606322 83 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AC092354.2-201ENST00000607786 514 ntBASIC4.21□□□□□ -1.74
MMP3P08254 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 AC119674.1-207ENST00000641355 633 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AL390862.1-201ENST00000635467 1469 ntBASIC4.21□□□□□ -1.74
MMP3P08254 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.2□□□□□ -1.74
MMP3P08254 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.2□□□□□ -1.74
MMP3P08254 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
MMP3P08254 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 SNRPEP3-201ENST00000338402 276 ntBASIC4.2□□□□□ -1.74
MMP3P08254 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 Y_RNA.77-201ENST00000362962 107 ntBASIC4.2□□□□□ -1.74
MMP3P08254 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
MMP3P08254 RPL7P8-201ENST00000411964 730 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AC245052.5-201ENST00000416320 649 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AC093698.1-201ENST00000423843 571 ntBASIC4.2□□□□□ -1.74
MMP3P08254 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.2□□□□□ -1.74
MMP3P08254 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.2□□□□□ -1.74
MMP3P08254 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.2□□□□□ -1.74
MMP3P08254 MTCYBP39-201ENST00000437562 491 ntBASIC4.2□□□□□ -1.74
MMP3P08254 SNORA71B-202ENST00000439232 272 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.2□□□□□ -1.74
MMP3P08254 AC009961.3-201ENST00000449832 765 ntBASIC4.2□□□□□ -1.74
MMP3P08254 KATNBL1P6-201ENST00000453433 915 ntBASIC4.2□□□□□ -1.74
MMP3P08254 PLGLA-201ENST00000465668 449 ntBASIC4.2□□□□□ -1.74
MMP3P08254 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.2□□□□□ -1.74
MMP3P08254 RAP1BP2-201ENST00000478270 544 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AC005726.1-201ENST00000494679 427 ntBASIC4.2□□□□□ -1.74
MMP3P08254 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.2□□□□□ -1.74
MMP3P08254 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.2□□□□□ -1.74
MMP3P08254 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
MMP3P08254 Y_RNA.655-201ENST00000515919 96 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.2□□□□□ -1.74
MMP3P08254 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.2□□□□□ -1.74
MMP3P08254 AC074051.3-201ENST00000570238 358 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.2□□□□□ -1.74
MMP3P08254 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.2□□□□□ -1.74
MMP3P08254 U73023.1-201ENST00000603134 700 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AC069304.2-201ENST00000605154 435 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AC024560.3-201ENST00000608482 349 ntBASIC4.2□□□□□ -1.74
MMP3P08254 AC079228.1-201ENST00000624774 1049 ntBASIC4.2□□□□□ -1.74
MMP3P08254 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
MMP3P08254 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 MTCO1P12-201ENST00000414273 1543 ntBASIC4.2□□□□□ -1.74
MMP3P08254 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
MMP3P08254 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MMP3P08254 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MMP3P08254 AC011266.1-201ENST00000624119 3569 ntBASIC4.19□□□□□ -1.74
MMP3P08254 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.19□□□□□ -1.74
MMP3P08254 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.19□□□□□ -1.74
MMP3P08254 AL049555.1-201ENST00000562834 1933 ntBASIC4.19□□□□□ -1.74
MMP3P08254 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MMP3P08254 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MMP3P08254 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MMP3P08254 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MMP3P08254 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
MMP3P08254 RNU6-500P-201ENST00000362349 107 ntBASIC4.19□□□□□ -1.74
MMP3P08254 RNA5SP72-201ENST00000364442 117 ntBASIC4.19□□□□□ -1.74
MMP3P08254 RNU6-441P-201ENST00000384545 106 ntBASIC4.19□□□□□ -1.74
MMP3P08254 RPS3AP26-201ENST00000398259 784 ntBASIC4.19□□□□□ -1.74
MMP3P08254 AL121834.1-202ENST00000404494 277 ntBASIC4.19□□□□□ -1.74
MMP3P08254 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.19□□□□□ -1.74
MMP3P08254 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MMP3P08254 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.19□□□□□ -1.74
MMP3P08254 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.19□□□□□ -1.74
MMP3P08254 SDCBPP2-201ENST00000424643 885 ntBASIC4.19□□□□□ -1.74
MMP3P08254 AP000907.1-201ENST00000428428 510 ntBASIC4.19□□□□□ -1.74
MMP3P08254 AC244035.1-201ENST00000430042 390 ntBASIC4.19□□□□□ -1.74
MMP3P08254 DLGAP5P1-201ENST00000430307 464 ntBASIC4.19□□□□□ -1.74
MMP3P08254 AC098826.1-201ENST00000433943 471 ntBASIC4.19□□□□□ -1.74
MMP3P08254 KCTD9P3-201ENST00000434597 1169 ntBASIC4.19□□□□□ -1.74
MMP3P08254 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.19□□□□□ -1.74
MMP3P08254 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.19□□□□□ -1.74
MMP3P08254 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.19□□□□□ -1.74
MMP3P08254 IFNWP4-201ENST00000453148 294 ntBASIC4.19□□□□□ -1.74
MMP3P08254 TRGVB-201ENST00000453257 471 ntBASIC4.19□□□□□ -1.74
MMP3P08254 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.19□□□□□ -1.74
MMP3P08254 AC092757.1-201ENST00000467293 467 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms