Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AL122126.1-201ENST00000546905 1318 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 Y_RNA.70-201ENST00000362886 110 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 RNU5E-5P-201ENST00000365379 116 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 Y_RNA.372-201ENST00000365599 102 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 RNA5SP372-201ENST00000390836 115 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AL356583.2-201ENST00000426536 280 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AL358472.1-201ENST00000431295 329 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC010881.1-201ENST00000433830 235 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 NFU1P2-201ENST00000448700 469 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 SNORD42A-201ENST00000459584 64 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC146507.1-201ENST00000468335 354 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC105252.1-201ENST00000503089 286 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 CYCSP2-201ENST00000558168 301 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 MIR5685-201ENST00000579080 79 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC245389.1-201ENST00000605141 529 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC069304.2-201ENST00000605154 435 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 CR381653.2-201ENST00000624041 768 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 FAM91A3P-201ENST00000456826 2544 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC019072.1-201ENST00000604535 1551 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 RNU6-657P-201ENST00000383904 107 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 MIR23B-201ENST00000384832 97 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 MIR92A2-201ENST00000385299 75 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 RPS3AP36-201ENST00000398190 775 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 VN1R8P-201ENST00000407739 893 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 RNU2-65P-201ENST00000410162 185 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 HMGB1P11-201ENST00000413899 637 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AIMP1P1-201ENST00000418670 937 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 HMGB1P31-201ENST00000437242 427 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 GDI2P2-201ENST00000445131 608 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 PDSS1P2-201ENST00000449397 678 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC022431.1-201ENST00000450941 438 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 SLC31A1P1-201ENST00000451221 567 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 RN7SL542P-201ENST00000467147 294 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC069439.1-201ENST00000494739 167 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC098799.2-201ENST00000509466 868 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 RNU7-143P-201ENST00000516781 65 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 DEFB131D-201ENST00000526803 184 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 HSPE1P5-201ENST00000561489 272 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC141257.3-201ENST00000572906 215 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 MIR5697-201ENST00000578045 78 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms