Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AL122126.1-201ENST00000546905 1318 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 Y_RNA.70-201ENST00000362886 110 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 RNU5E-5P-201ENST00000365379 116 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 Y_RNA.372-201ENST00000365599 102 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 RNA5SP372-201ENST00000390836 115 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AL356583.2-201ENST00000426536 280 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AL358472.1-201ENST00000431295 329 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC010881.1-201ENST00000433830 235 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 NFU1P2-201ENST00000448700 469 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 SNORD42A-201ENST00000459584 64 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC146507.1-201ENST00000468335 354 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC105252.1-201ENST00000503089 286 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 CYCSP2-201ENST00000558168 301 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 MIR5685-201ENST00000579080 79 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC245389.1-201ENST00000605141 529 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC069304.2-201ENST00000605154 435 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 CR381653.2-201ENST00000624041 768 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DOAP06340 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOAP06340 FAM91A3P-201ENST00000456826 2544 ntBASIC4.81□□□□□ -1.64
HLA-DOAP06340 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC019072.1-201ENST00000604535 1551 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 RNU6-657P-201ENST00000383904 107 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 MIR23B-201ENST00000384832 97 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 MIR92A2-201ENST00000385299 75 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 RPS3AP36-201ENST00000398190 775 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 VN1R8P-201ENST00000407739 893 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 RNU2-65P-201ENST00000410162 185 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 HMGB1P11-201ENST00000413899 637 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AIMP1P1-201ENST00000418670 937 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 HMGB1P31-201ENST00000437242 427 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 GDI2P2-201ENST00000445131 608 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 PDSS1P2-201ENST00000449397 678 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC022431.1-201ENST00000450941 438 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 SLC31A1P1-201ENST00000451221 567 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 RN7SL542P-201ENST00000467147 294 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC069439.1-201ENST00000494739 167 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC098799.2-201ENST00000509466 868 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 RNU7-143P-201ENST00000516781 65 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 DEFB131D-201ENST00000526803 184 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 HSPE1P5-201ENST00000561489 272 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC141257.3-201ENST00000572906 215 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 MIR5697-201ENST00000578045 78 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms