Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3□□□□□ -1.93
APOEP02649 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3□□□□□ -1.93
APOEP02649 AC034105.3-201ENST00000565294 442 ntBASIC3□□□□□ -1.93
APOEP02649 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3□□□□□ -1.93
APOEP02649 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3□□□□□ -1.93
APOEP02649 AC007566.2-201ENST00000603642 413 ntBASIC3□□□□□ -1.93
APOEP02649 AC009039.2-201ENST00000624524 529 ntBASIC3□□□□□ -1.93
APOEP02649 AL137790.1-201ENST00000634283 177 ntBASIC3□□□□□ -1.93
APOEP02649 AC116096.1-201ENST00000566804 2314 ntBASIC3□□□□□ -1.93
APOEP02649 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOEP02649 RNU4-31P-201ENST00000384211 141 ntBASIC2.99□□□□□ -1.93
APOEP02649 RNU2-71P-201ENST00000411395 189 ntBASIC2.99□□□□□ -1.93
APOEP02649 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.99□□□□□ -1.93
APOEP02649 COTL1P1-201ENST00000422309 375 ntBASIC2.99□□□□□ -1.93
APOEP02649 AL356806.1-201ENST00000422524 916 ntBASIC2.99□□□□□ -1.93
APOEP02649 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.99□□□□□ -1.93
APOEP02649 SAR1AP4-201ENST00000429225 591 ntBASIC2.99□□□□□ -1.93
APOEP02649 RPS29P6-201ENST00000438196 145 ntBASIC2.99□□□□□ -1.93
APOEP02649 AL592437.1-201ENST00000443781 492 ntBASIC2.99□□□□□ -1.93
APOEP02649 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.99□□□□□ -1.93
APOEP02649 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.99□□□□□ -1.93
APOEP02649 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.99□□□□□ -1.93
APOEP02649 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.99□□□□□ -1.93
APOEP02649 AC008494.2-201ENST00000514544 370 ntBASIC2.99□□□□□ -1.93
APOEP02649 AC104115.2-201ENST00000523026 687 ntBASIC2.99□□□□□ -1.93
APOEP02649 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.99□□□□□ -1.93
APOEP02649 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.99□□□□□ -1.93
APOEP02649 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.99□□□□□ -1.93
APOEP02649 AC090751.1-201ENST00000566966 267 ntBASIC2.99□□□□□ -1.93
APOEP02649 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.99□□□□□ -1.93
APOEP02649 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
APOEP02649 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOEP02649 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOEP02649 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
APOEP02649 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.98□□□□□ -1.93
APOEP02649 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOEP02649 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
APOEP02649 RNU6-7-201ENST00000364784 107 ntBASIC2.98□□□□□ -1.93
APOEP02649 RNU6-8-201ENST00000365467 107 ntBASIC2.98□□□□□ -1.93
APOEP02649 MIR181B1-201ENST00000385240 110 ntBASIC2.98□□□□□ -1.93
APOEP02649 MTND4P13-201ENST00000402078 1023 ntBASIC2.98□□□□□ -1.93
APOEP02649 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.98□□□□□ -1.93
APOEP02649 RNU6-564P-201ENST00000410983 104 ntBASIC2.98□□□□□ -1.93
APOEP02649 RPL19P1-201ENST00000411635 428 ntBASIC2.98□□□□□ -1.93
APOEP02649 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.98□□□□□ -1.93
APOEP02649 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.98□□□□□ -1.93
APOEP02649 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.98□□□□□ -1.93
APOEP02649 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.98□□□□□ -1.93
APOEP02649 RPL37P4-201ENST00000448908 268 ntBASIC2.98□□□□□ -1.93
APOEP02649 RNU6-491P-201ENST00000516099 110 ntBASIC2.98□□□□□ -1.93
APOEP02649 SCARNA13-201ENST00000516672 275 ntBASIC2.98□□□□□ -1.93
APOEP02649 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.98□□□□□ -1.93
APOEP02649 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOEP02649 AC074029.1-201ENST00000552531 1044 ntBASIC2.98□□□□□ -1.93
APOEP02649 MTCO3P13-201ENST00000577757 781 ntBASIC2.98□□□□□ -1.93
APOEP02649 LARP7P3-201ENST00000579888 337 ntBASIC2.98□□□□□ -1.93
APOEP02649 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.98□□□□□ -1.93
APOEP02649 AC024153.1-201ENST00000603103 365 ntBASIC2.98□□□□□ -1.93
APOEP02649 AL020991.1-201ENST00000612314 373 ntBASIC2.98□□□□□ -1.93
APOEP02649 AL390240.1-201ENST00000612950 384 ntBASIC2.98□□□□□ -1.93
APOEP02649 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.98□□□□□ -1.93
APOEP02649 Z99129.2-201ENST00000619967 314 ntBASIC2.98□□□□□ -1.93
APOEP02649 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.98□□□□□ -1.93
APOEP02649 AC022509.4-201ENST00000621404 572 ntBASIC2.98□□□□□ -1.93
APOEP02649 AC006386.2-201ENST00000624491 75 ntBASIC2.98□□□□□ -1.93
APOEP02649 AC012005.1-201ENST00000624575 75 ntBASIC2.98□□□□□ -1.93
APOEP02649 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.98□□□□□ -1.93
APOEP02649 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.98□□□□□ -1.93
APOEP02649 AL365361.1-201ENST00000566942 3481 ntBASIC2.98□□□□□ -1.93
APOEP02649 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOEP02649 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOEP02649 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOEP02649 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.97□□□□□ -1.93
APOEP02649 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 OR4K6P-201ENST00000416478 897 ntBASIC2.97□□□□□ -1.93
APOEP02649 MRPL50P2-201ENST00000416821 482 ntBASIC2.97□□□□□ -1.93
APOEP02649 DUTP6-201ENST00000425573 462 ntBASIC2.97□□□□□ -1.93
APOEP02649 AC091390.3-201ENST00000426478 338 ntBASIC2.97□□□□□ -1.93
APOEP02649 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 AC107083.1-201ENST00000439643 279 ntBASIC2.97□□□□□ -1.93
APOEP02649 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.97□□□□□ -1.93
APOEP02649 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.97□□□□□ -1.93
APOEP02649 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 AC104689.1-201ENST00000473356 768 ntBASIC2.97□□□□□ -1.93
APOEP02649 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.97□□□□□ -1.93
APOEP02649 AC104687.1-201ENST00000485829 412 ntBASIC2.97□□□□□ -1.93
APOEP02649 AC097462.2-201ENST00000504623 481 ntBASIC2.97□□□□□ -1.93
APOEP02649 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 AP001207.1-201ENST00000524051 481 ntBASIC2.97□□□□□ -1.93
APOEP02649 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 AC004923.2-201ENST00000529649 369 ntBASIC2.97□□□□□ -1.93
APOEP02649 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.97□□□□□ -1.93
APOEP02649 HSPE1P20-201ENST00000538133 289 ntBASIC2.97□□□□□ -1.93
APOEP02649 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.97□□□□□ -1.93
APOEP02649 RPL23AP88-201ENST00000605759 454 ntBASIC2.97□□□□□ -1.93
APOEP02649 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.97□□□□□ -1.93
APOEP02649 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms