Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL4A1P02462 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.77□□□□□ -1.97
COL4A1P02462 RWDD4P2-201ENST00000426392 563 ntBASIC2.77□□□□□ -1.97
COL4A1P02462 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.77□□□□□ -1.97
COL4A1P02462 AL162388.1-201ENST00000450912 352 ntBASIC2.77□□□□□ -1.97
COL4A1P02462 RWDD4P1-201ENST00000488019 565 ntBASIC2.77□□□□□ -1.97
COL4A1P02462 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL4A1P02462 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.77□□□□□ -1.97
COL4A1P02462 AL139286.1-201ENST00000604465 483 ntBASIC2.77□□□□□ -1.97
COL4A1P02462 AC132825.8-201ENST00000640783 297 ntBASIC2.77□□□□□ -1.97
COL4A1P02462 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
COL4A1P02462 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.77□□□□□ -1.97
COL4A1P02462 AC022031.1-201ENST00000585985 2593 ntBASIC2.77□□□□□ -1.97
COL4A1P02462 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.76□□□□□ -1.97
COL4A1P02462 SNORA51.4-201ENST00000364993 124 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 RNU1-51P-201ENST00000365345 176 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 SNORA67.3-201ENST00000384366 140 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.76□□□□□ -1.97
COL4A1P02462 MUPP-201ENST00000438111 566 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.76□□□□□ -1.97
COL4A1P02462 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.76□□□□□ -1.97
COL4A1P02462 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A1P02462 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC123768.4-201ENST00000616244 701 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 AL136981.2-201ENST00000617319 734 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 AC010809.3-201ENST00000621310 641 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 AC026634.1-201ENST00000634369 198 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.76□□□□□ -1.97
COL4A1P02462 BX005019.1-201ENST00000561881 1810 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL4A1P02462 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.76□□□□□ -1.97
COL4A1P02462 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL4A1P02462 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL4A1P02462 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COL4A1P02462 RPS24P8-201ENST00000431490 402 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 RNU7-170P-201ENST00000459303 61 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.76□□□□□ -1.97
COL4A1P02462 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC026464.5-201ENST00000562497 722 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.76□□□□□ -1.97
COL4A1P02462 AC103710.2-201ENST00000609912 942 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 MIR6845-201ENST00000613182 61 ntBASIC2.76□□□□□ -1.97
COL4A1P02462 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.76□□□□□ -1.97
COL4A1P02462 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A1P02462 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A1P02462 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A1P02462 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL4A1P02462 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.75□□□□□ -1.97
COL4A1P02462 MIR142-201ENST00000384835 87 ntBASIC2.75□□□□□ -1.97
COL4A1P02462 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A1P02462 MTATP6P11-201ENST00000428071 670 ntBASIC2.75□□□□□ -1.97
COL4A1P02462 RPL36AP6-201ENST00000435770 321 ntBASIC2.75□□□□□ -1.97
COL4A1P02462 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A1P02462 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC2.75□□□□□ -1.97
COL4A1P02462 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.75□□□□□ -1.97
COL4A1P02462 TRBV1-201ENST00000476502 284 ntBASIC2.75□□□□□ -1.97
COL4A1P02462 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.75□□□□□ -1.97
COL4A1P02462 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
COL4A1P02462 NRBF2P1-201ENST00000587407 859 ntBASIC2.75□□□□□ -1.97
COL4A1P02462 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.75□□□□□ -1.97
COL4A1P02462 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
COL4A1P02462 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
COL4A1P02462 Y_RNA.238-201ENST00000364441 102 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 RNU6-253P-201ENST00000384730 105 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 NDUFB4P5-201ENST00000415445 361 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 RANP7-201ENST00000418085 644 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 SDCBPP3-201ENST00000419629 891 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.74□□□□□ -1.97
COL4A1P02462 RPL7P12-201ENST00000446719 750 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 RPL21P99-201ENST00000480369 423 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 FAM172BP-201ENST00000487497 1089 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 AC068305.1-201ENST00000497406 726 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 XKRY-201ENST00000510392 1100 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.74□□□□□ -1.97
COL4A1P02462 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.74□□□□□ -1.97
COL4A1P02462 AC012182.1-201ENST00000570133 895 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 MIR6873-201ENST00000622788 63 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 PISRT1-201ENST00000626175 531 ntBASIC2.74□□□□□ -1.97
COL4A1P02462 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL4A1P02462 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.74□□□□□ -1.97
COL4A1P02462 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
COL4A1P02462 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.73□□□□□ -1.97
COL4A1P02462 AC098826.1-201ENST00000433943 471 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A1P02462 GSTA11P-201ENST00000452866 669 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 HMGN2P23-201ENST00000456759 269 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 EIF2S2P4-201ENST00000461070 984 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 AP000893.1-201ENST00000474462 794 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 AC104090.1-201ENST00000506341 1171 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.73□□□□□ -1.97
COL4A1P02462 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.73□□□□□ -1.97
COL4A1P02462 VTA1P2-201ENST00000520205 911 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms