Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A1P02452 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.97□□□□□ -1.93
COL1A1P02452 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A1P02452 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A1P02452 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A1P02452 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A1P02452 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
COL1A1P02452 SNORD114-30-201ENST00000364448 72 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
COL1A1P02452 AL162578.1-201ENST00000406202 378 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 BTF3P7-201ENST00000407097 488 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.96□□□□□ -1.93
COL1A1P02452 BTG3P1-201ENST00000435859 716 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 AL353705.4-201ENST00000449661 238 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 HMGB3P21-201ENST00000452483 547 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 AC005921.1-201ENST00000510589 286 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.96□□□□□ -1.93
COL1A1P02452 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.96□□□□□ -1.93
COL1A1P02452 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.96□□□□□ -1.93
COL1A1P02452 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.96□□□□□ -1.93
COL1A1P02452 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
COL1A1P02452 AC009318.3-201ENST00000616916 503 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 AC010809.3-201ENST00000621310 641 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.96□□□□□ -1.93
COL1A1P02452 LRRC77P-213ENST00000637727 880 ntBASIC2.96□□□□□ -1.93
COL1A1P02452 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
COL1A1P02452 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
COL1A1P02452 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL1A1P02452 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL1A1P02452 RNA5SP99-201ENST00000364020 114 ntBASIC2.96□□□□□ -1.94
COL1A1P02452 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.96□□□□□ -1.94
COL1A1P02452 RPL23AP45-201ENST00000476406 468 ntBASIC2.96□□□□□ -1.94
COL1A1P02452 AC126182.1-201ENST00000478134 357 ntBASIC2.96□□□□□ -1.94
COL1A1P02452 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.96□□□□□ -1.94
COL1A1P02452 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.96□□□□□ -1.94
COL1A1P02452 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.96□□□□□ -1.94
COL1A1P02452 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.96□□□□□ -1.94
COL1A1P02452 OR11H5P-201ENST00000554039 926 ntBASIC2.96□□□□□ -1.94
COL1A1P02452 RPL23AP84-201ENST00000571193 464 ntBASIC2.96□□□□□ -1.94
COL1A1P02452 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.96□□□□□ -1.94
COL1A1P02452 AC092184.1-201ENST00000625042 715 ntBASIC2.96□□□□□ -1.94
COL1A1P02452 AL512643.1-201ENST00000635735 524 ntBASIC2.96□□□□□ -1.94
COL1A1P02452 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
COL1A1P02452 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL1A1P02452 ZNF72P-201ENST00000425869 1908 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL1A1P02452 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL1A1P02452 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL1A1P02452 RNA5SP456-201ENST00000364002 114 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL1A1P02452 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 EIF5P1-201ENST00000400019 1231 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 RPL7P53-201ENST00000421245 739 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 FAM103A2P-201ENST00000444122 354 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 COX6CP2-201ENST00000444980 225 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A1P02452 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A1P02452 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A1P02452 SMARCE1P4-201ENST00000523647 241 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 OR8X1P-201ENST00000534542 869 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 AC061975.8-201ENST00000587058 721 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 AC078899.3-201ENST00000599065 212 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 AL354950.1-201ENST00000614150 568 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 AL356274.1-201ENST00000617064 410 ntBASIC2.95□□□□□ -1.94
COL1A1P02452 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
COL1A1P02452 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL1A1P02452 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL1A1P02452 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL1A1P02452 RNU4-7P-201ENST00000364758 141 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.94□□□□□ -1.94
COL1A1P02452 RPS3AP26-201ENST00000398259 784 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.94□□□□□ -1.94
COL1A1P02452 OR51A3P-201ENST00000413596 924 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 AL513175.2-201ENST00000422071 443 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.94□□□□□ -1.94
COL1A1P02452 VN1R96P-201ENST00000446052 858 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 VN1R17P-201ENST00000472048 1090 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 HAUS1P1-201ENST00000505275 832 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.94□□□□□ -1.94
COL1A1P02452 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.94□□□□□ -1.94
COL1A1P02452 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.94□□□□□ -1.94
COL1A1P02452 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.94□□□□□ -1.94
COL1A1P02452 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
COL1A1P02452 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.94□□□□□ -1.94
COL1A1P02452 AC009163.5-201ENST00000575421 637 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 MIR4512-201ENST00000583257 77 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.94□□□□□ -1.94
COL1A1P02452 AC046143.2-201ENST00000609789 160 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 CFTRP2-201ENST00000634304 199 ntBASIC2.94□□□□□ -1.94
COL1A1P02452 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL1A1P02452 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
COL1A1P02452 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL1A1P02452 MTCO1P14-201ENST00000441695 1559 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 SNORD21-201ENST00000383953 95 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 CYCSP45-201ENST00000402289 315 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.93□□□□□ -1.94
COL1A1P02452 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms