Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL691482.1-201ENST00000453255 87 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 MTCO3P10-201ENST00000455912 772 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC005229.2-201ENST00000456995 399 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 RPS17P2-201ENST00000461663 408 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC007547.1-201ENST00000462177 490 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 RPL21P71-201ENST00000465598 459 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 RN7SL547P-201ENST00000490793 290 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC020890.1-201ENST00000491837 504 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM13O60858 AC025164.1-201ENST00000496249 478 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 MTCO1P29-201ENST00000496868 288 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM13O60858 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM13O60858 AC093303.1-201ENST00000514549 295 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 HMGB1P41-201ENST00000520234 440 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC027544.3-201ENST00000535082 757 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM13O60858 HMGB1P6-201ENST00000569046 646 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM13O60858 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
TRIM13O60858 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM13O60858 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM13O60858 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM13O60858 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM13O60858 RPL26P30-202ENST00000602923 645 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC104785.1-201ENST00000603220 588 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC008782.1-201ENST00000603386 430 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC104695.2-201ENST00000605056 775 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AL359757.2-201ENST00000624309 274 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TRIM13O60858 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM13O60858 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM13O60858 OR11H5P-202ENST00000641612 1325 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM13O60858 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM13O60858 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 CASC19-204ENST00000641001 2055 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 SNORA73.1-201ENST00000363107 205 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 Y_RNA.112-201ENST00000363250 102 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 Y_RNA.187-201ENST00000363918 113 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 MTCYBP4-201ENST00000401524 249 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 RPL7P25-201ENST00000404151 721 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 RN7SKP125-201ENST00000410481 302 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 RNU4-14P-201ENST00000410858 122 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM13O60858 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM13O60858 SLC35E1P1-201ENST00000419313 864 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM13O60858 RSU1P2-202ENST00000437884 485 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 SNRPEP7-201ENST00000438350 220 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM13O60858 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM13O60858 AC073109.1-201ENST00000445066 978 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 CYCSP34-201ENST00000458172 304 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 RN7SL799P-201ENST00000475891 298 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM13O60858 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM13O60858 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 AC107222.1-201ENST00000510899 637 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM13O60858 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM13O60858 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 AF279873.1-201ENST00000523393 313 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 AP000889.2-201ENST00000532684 490 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 BNIP3P6-201ENST00000549284 499 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM13O60858 AC022404.1-201ENST00000555320 273 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 RNF138P2-201ENST00000603490 592 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 APOOP1-201ENST00000604695 592 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 RNA5SP440-201ENST00000612665 119 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 AC090510.2-201ENST00000617465 629 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 RMST_9.1-201ENST00000619945 193 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TRIM13O60858 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
TRIM13O60858 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 AC012618.3-205ENST00000637896 1496 ntBASIC4.93□□□□□ -1.62
TRIM13O60858 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM13O60858 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms