Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL592436.1-201ENST00000605135 558 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX3O60493 AC017037.3-201ENST00000625016 472 ntBASIC3.56□□□□□ -1.84
SNX3O60493 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX3O60493 FAM91A3P-201ENST00000456826 2544 ntBASIC3.55□□□□□ -1.84
SNX3O60493 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNX3O60493 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNX3O60493 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNX3O60493 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SNX3O60493 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX3O60493 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SNX3O60493 SNORA4.1-201ENST00000364263 144 ntBASIC3.55□□□□□ -1.84
SNX3O60493 RNA5SP97-201ENST00000365006 84 ntBASIC3.55□□□□□ -1.84
SNX3O60493 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SNX3O60493 RNU6-878P-201ENST00000384578 110 ntBASIC3.55□□□□□ -1.84
SNX3O60493 RNU6-821P-201ENST00000390995 107 ntBASIC3.55□□□□□ -1.84
SNX3O60493 HMGB1P17-201ENST00000403495 628 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AL583834.1-201ENST00000406943 343 ntBASIC3.55□□□□□ -1.84
SNX3O60493 ELOCP19-201ENST00000411919 318 ntBASIC3.55□□□□□ -1.84
SNX3O60493 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX3O60493 AC245291.1-201ENST00000419501 328 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX3O60493 AL953862.1-201ENST00000423016 168 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX3O60493 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX3O60493 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX3O60493 AL357552.1-201ENST00000445254 415 ntBASIC3.55□□□□□ -1.84
SNX3O60493 RSL24D1P3-201ENST00000449255 495 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX3O60493 AL445669.2-201ENST00000454425 421 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC007967.1-201ENST00000455422 1159 ntBASIC3.55□□□□□ -1.84
SNX3O60493 HMGN1P18-201ENST00000457642 277 ntBASIC3.55□□□□□ -1.84
SNX3O60493 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX3O60493 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SNX3O60493 RNU7-136P-201ENST00000458819 69 ntBASIC3.55□□□□□ -1.84
SNX3O60493 snoU13.1-201ENST00000459157 104 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AL049830.2-201ENST00000480072 201 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AP000563.1-201ENST00000490865 758 ntBASIC3.55□□□□□ -1.84
SNX3O60493 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX3O60493 AC091167.1-201ENST00000492017 396 ntBASIC3.55□□□□□ -1.84
SNX3O60493 RPL5P23-201ENST00000496040 868 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC231760.1-201ENST00000498002 260 ntBASIC3.55□□□□□ -1.84
SNX3O60493 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNX3O60493 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNX3O60493 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX3O60493 AC147055.4-201ENST00000504399 745 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC114967.1-201ENST00000504890 259 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC098862.1-201ENST00000504991 413 ntBASIC3.55□□□□□ -1.84
SNX3O60493 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX3O60493 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX3O60493 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX3O60493 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX3O60493 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNX3O60493 ZNF321P-202ENST00000550843 495 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC051619.2-201ENST00000559063 397 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX3O60493 AL845331.3-202ENST00000562856 261 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.55□□□□□ -1.84
SNX3O60493 AC024940.4-201ENST00000605507 246 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC009464.1-201ENST00000615731 469 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AL136981.2-201ENST00000617319 734 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC008147.4-201ENST00000617570 1204 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC091925.2-201ENST00000625059 256 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX3O60493 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX3O60493 AC007496.3-201ENST00000624987 3443 ntBASIC3.55□□□□□ -1.84
SNX3O60493 AC007823.1-201ENST00000569932 1566 ntBASIC3.55□□□□□ -1.84
SNX3O60493 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNX3O60493 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX3O60493 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
SNX3O60493 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNX3O60493 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNX3O60493 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX3O60493 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX3O60493 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX3O60493 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX3O60493 RPS16P5-201ENST00000406501 404 ntBASIC3.54□□□□□ -1.84
SNX3O60493 RNU2-15P-201ENST00000410692 191 ntBASIC3.54□□□□□ -1.84
SNX3O60493 RNU4-6P-201ENST00000410804 122 ntBASIC3.54□□□□□ -1.84
SNX3O60493 PIGPP2-201ENST00000411569 458 ntBASIC3.54□□□□□ -1.84
SNX3O60493 AC017079.2-201ENST00000416102 485 ntBASIC3.54□□□□□ -1.84
SNX3O60493 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNX3O60493 AL008629.1-201ENST00000438615 184 ntBASIC3.54□□□□□ -1.84
SNX3O60493 AL772161.1-201ENST00000439130 476 ntBASIC3.54□□□□□ -1.84
SNX3O60493 MTND2P19-201ENST00000449129 1012 ntBASIC3.54□□□□□ -1.84
SNX3O60493 AC078817.1-201ENST00000492623 435 ntBASIC3.54□□□□□ -1.84
SNX3O60493 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX3O60493 HSPE1P23-201ENST00000509838 286 ntBASIC3.54□□□□□ -1.84
SNX3O60493 RNU6-150P-201ENST00000516237 95 ntBASIC3.54□□□□□ -1.84
SNX3O60493 SNORA64.4-201ENST00000516632 81 ntBASIC3.54□□□□□ -1.84
SNX3O60493 AC093331.1-201ENST00000521474 169 ntBASIC3.54□□□□□ -1.84
SNX3O60493 AP003461.1-201ENST00000528866 78 ntBASIC3.54□□□□□ -1.84
SNX3O60493 OR4P1P-201ENST00000530808 1136 ntBASIC3.54□□□□□ -1.84
SNX3O60493 AC024224.1-201ENST00000538284 609 ntBASIC3.54□□□□□ -1.84
SNX3O60493 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX3O60493 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.54□□□□□ -1.84
SNX3O60493 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX3O60493 AC090888.2-201ENST00000559765 1144 ntBASIC3.54□□□□□ -1.84
SNX3O60493 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms