Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SDAD1P3-201ENST00000427380 333 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXA2O43364 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA2O43364 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HOXA2O43364 RN7SL177P-201ENST00000476596 299 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 AP000926.1-201ENST00000479573 241 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 RPL21P103-201ENST00000479921 488 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 IGKV2D-23-201ENST00000518179 286 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA2O43364 AP005639.1-201ENST00000526939 192 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA2O43364 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA2O43364 SNORD95-201ENST00000579879 68 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 RNU4ATAC-201ENST00000580972 127 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 AC022467.1-201ENST00000614738 749 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA2O43364 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HOXA2O43364 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA2O43364 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA2O43364 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA2O43364 AC125336.1-201ENST00000508893 2827 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA2O43364 AC108751.5-201ENST00000492880 1336 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 AC010329.2-201ENST00000595195 2737 ntBASIC6.48□□□□□ -1.37
HOXA2O43364 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXA2O43364 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXA2O43364 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXA2O43364 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXA2O43364 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXA2O43364 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA2O43364 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HOXA2O43364 AC232271.1-201ENST00000602455 2715 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
HOXA2O43364 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXA2O43364 RNU4-42P-201ENST00000364738 142 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 SNORD51-201ENST00000384320 80 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 Y_RNA.518-201ENST00000384552 113 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA2O43364 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXA2O43364 PRELID3BP1-201ENST00000457142 540 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AC008481.1-201ENST00000463278 396 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 RN7SL352P-201ENST00000466002 277 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 FTH1P24-201ENST00000503502 462 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXA2O43364 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXA2O43364 RNU6-27P-201ENST00000516146 107 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 RNU6-111P-201ENST00000517179 105 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 IGLVIV-53-201ENST00000520107 367 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXA2O43364 HMGN2P36-201ENST00000529541 409 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AC063949.1-201ENST00000552900 865 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXA2O43364 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXA2O43364 AC119403.2-201ENST00000590960 598 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AC020916.2-201ENST00000591242 360 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AL031176.1-201ENST00000604554 466 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 RAC1P9-201ENST00000604990 392 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 AC091925.2-201ENST00000625059 256 ntBASIC6.47□□□□□ -1.37
HOXA2O43364 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
HOXA2O43364 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HOXA2O43364 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA2O43364 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXA2O43364 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXA2O43364 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.46□□□□□ -1.37
HOXA2O43364 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA2O43364 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA2O43364 Y_RNA.64-201ENST00000362845 102 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 Y_RNA.180-201ENST00000363867 113 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
HOXA2O43364 AL139039.1-201ENST00000401900 692 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 AL138885.1-201ENST00000405921 675 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXA2O43364 RNU4-65P-201ENST00000410473 140 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 RPL36P18-201ENST00000419316 318 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXA2O43364 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXA2O43364 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXA2O43364 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA2O43364 CHEK2P4-201ENST00000450340 246 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 RNU7-187P-201ENST00000458985 68 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 CR383656.1-201ENST00000484916 377 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 AC092436.3-201ENST00000511788 257 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 RNU7-4P-201ENST00000516961 62 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 SNORA81.3-201ENST00000517283 198 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA2O43364 SETP7-201ENST00000552169 453 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXA2O43364 AC084783.1-201ENST00000565846 910 ntBASIC6.46□□□□□ -1.38
HOXA2O43364 MIR3176-201ENST00000582210 90 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms