Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LSM1O15116 RNU6-1249P-201ENST00000363237 111 ntBASIC3.16□□□□□ -1.9
LSM1O15116 RNA5SP479-201ENST00000364858 117 ntBASIC3.16□□□□□ -1.9
LSM1O15116 RN7SKP202-201ENST00000410439 330 ntBASIC3.16□□□□□ -1.9
LSM1O15116 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM1O15116 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM1O15116 RPL31P54-201ENST00000429803 370 ntBASIC3.16□□□□□ -1.9
LSM1O15116 AC109583.1-201ENST00000432156 268 ntBASIC3.16□□□□□ -1.9
LSM1O15116 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM1O15116 HSFY3P-201ENST00000444242 1191 ntBASIC3.16□□□□□ -1.9
LSM1O15116 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM1O15116 AC115115.1-201ENST00000449927 248 ntBASIC3.16□□□□□ -1.9
LSM1O15116 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM1O15116 AC010301.1-201ENST00000473936 355 ntBASIC3.16□□□□□ -1.9
LSM1O15116 RPS4XP6-201ENST00000477670 797 ntBASIC3.16□□□□□ -1.9
LSM1O15116 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM1O15116 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
LSM1O15116 OR5H3P-201ENST00000502817 919 ntBASIC3.16□□□□□ -1.9
LSM1O15116 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM1O15116 HSPD1P15-201ENST00000505573 1122 ntBASIC3.16□□□□□ -1.9
LSM1O15116 KLHL2P1-201ENST00000508691 521 ntBASIC3.16□□□□□ -1.9
LSM1O15116 MTCYBP37-201ENST00000510642 1133 ntBASIC3.16□□□□□ -1.9
LSM1O15116 HMGN1P15-201ENST00000513870 295 ntBASIC3.16□□□□□ -1.9
LSM1O15116 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
LSM1O15116 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM1O15116 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM1O15116 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM1O15116 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM1O15116 AC128687.1-201ENST00000605304 619 ntBASIC3.16□□□□□ -1.9
LSM1O15116 AC073968.1-201ENST00000618594 637 ntBASIC3.16□□□□□ -1.9
LSM1O15116 AC092650.2-201ENST00000619984 902 ntBASIC3.16□□□□□ -1.9
LSM1O15116 AC097460.3-201ENST00000623099 442 ntBASIC3.16□□□□□ -1.9
LSM1O15116 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM1O15116 MTND2P41-201ENST00000637599 773 ntBASIC3.16□□□□□ -1.9
LSM1O15116 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LSM1O15116 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.9
LSM1O15116 AC244517.1-201ENST00000606030 2086 ntBASIC3.15□□□□□ -1.9
LSM1O15116 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM1O15116 RNU6-821P-201ENST00000390995 107 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RPL21P75-201ENST00000396599 483 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RPL21P28-201ENST00000401418 483 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AL592114.1-201ENST00000403842 483 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RNU4-65P-201ENST00000410473 140 ntBASIC3.15□□□□□ -1.91
LSM1O15116 SSXP9-201ENST00000417503 292 ntBASIC3.15□□□□□ -1.91
LSM1O15116 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM1O15116 AL390023.1-201ENST00000428836 262 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RABEPKP1-201ENST00000440529 1026 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM1O15116 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM1O15116 snoU13.4-201ENST00000458916 104 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RPL21P39-201ENST00000463605 483 ntBASIC3.15□□□□□ -1.91
LSM1O15116 PABPC1P3-201ENST00000469174 459 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RPS23P3-201ENST00000470993 430 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC011979.1-201ENST00000472300 483 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RPL21P93-201ENST00000480465 489 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC233702.1-201ENST00000482905 502 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC087190.1-201ENST00000484462 480 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RPL21P13-201ENST00000488305 481 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC093591.1-201ENST00000491435 481 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RPL21P129-201ENST00000491732 478 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC093278.1-201ENST00000494700 600 ntBASIC3.15□□□□□ -1.91
LSM1O15116 RPL21P16-201ENST00000495531 483 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC096751.1-202ENST00000502691 1067 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC105914.1-201ENST00000511798 226 ntBASIC3.15□□□□□ -1.91
LSM1O15116 APOOP4-201ENST00000513530 597 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM1O15116 SETP2-201ENST00000553886 926 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM1O15116 AC092474.3-201ENST00000603022 568 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AL731566.2-201ENST00000618971 317 ntBASIC3.15□□□□□ -1.91
LSM1O15116 AC244258.1-201ENST00000637553 1071 ntBASIC3.15□□□□□ -1.91
LSM1O15116 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LSM1O15116 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM1O15116 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM1O15116 AL353743.1-202ENST00000431724 1695 ntBASIC3.14□□□□□ -1.91
LSM1O15116 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM1O15116 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.14□□□□□ -1.91
LSM1O15116 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM1O15116 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM1O15116 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM1O15116 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.14□□□□□ -1.91
LSM1O15116 RNA5SP44-201ENST00000410446 133 ntBASIC3.14□□□□□ -1.91
LSM1O15116 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM1O15116 UBE2D3P2-201ENST00000424409 445 ntBASIC3.14□□□□□ -1.91
LSM1O15116 DUTP6-201ENST00000425573 462 ntBASIC3.14□□□□□ -1.91
LSM1O15116 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.14□□□□□ -1.91
LSM1O15116 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.14□□□□□ -1.91
LSM1O15116 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM1O15116 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM1O15116 HSPD1P21-201ENST00000436541 245 ntBASIC3.14□□□□□ -1.91
LSM1O15116 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.14□□□□□ -1.91
LSM1O15116 AC122718.1-201ENST00000439448 744 ntBASIC3.14□□□□□ -1.91
LSM1O15116 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.14□□□□□ -1.91
LSM1O15116 AC002542.1-201ENST00000440683 193 ntBASIC3.14□□□□□ -1.91
LSM1O15116 BTBD7P2-201ENST00000441962 620 ntBASIC3.14□□□□□ -1.91
LSM1O15116 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.14□□□□□ -1.91
LSM1O15116 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LSM1O15116 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LSM1O15116 SETP6-201ENST00000479329 568 ntBASIC3.14□□□□□ -1.91
LSM1O15116 VPS26AP1-201ENST00000483197 979 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms