Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL121834.1-202ENST00000404494 277 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 VN1R8P-201ENST00000407739 893 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AL160275.2-201ENST00000412010 394 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 PGBD4P8-201ENST00000412993 562 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM38O00635 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 CCDC58P2-201ENST00000417131 366 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 RPL7P30-201ENST00000420888 709 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 RPL21P91-201ENST00000429231 479 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM38O00635 AC092001.1-201ENST00000453012 261 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AMD1P1-201ENST00000457220 922 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 RPS20P24-201ENST00000457473 361 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC072039.1-201ENST00000477611 581 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM38O00635 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 RNU6-528P-201ENST00000516926 100 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 DUXAP2-201ENST00000519198 589 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 DEFB109D-201ENST00000529497 240 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM38O00635 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM38O00635 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 AC007224.1-201ENST00000564410 144 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AL669831.4-202ENST00000590817 238 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC090181.2-201ENST00000602975 672 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC008966.2-201ENST00000606157 453 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC004067.1-201ENST00000608733 700 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC007684.1-201ENST00000609671 477 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC013476.2-201ENST00000614456 459 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 AL158196.1-201ENST00000616786 434 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC072046.2-201ENST00000618366 268 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM38O00635 AL445264.1-201ENST00000621719 171 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 AC004009.2-201ENST00000623016 728 ntBASIC4.48□□□□□ -1.69
TRIM38O00635 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM38O00635 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM38O00635 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TRIM38O00635 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM38O00635 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM38O00635 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM38O00635 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM38O00635 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM38O00635 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM38O00635 AL133243.3-201ENST00000617415 3004 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC027290.2-201ENST00000623210 18662 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM38O00635 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM38O00635 RNU6-1279P-201ENST00000383917 103 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 RNU6-723P-201ENST00000383973 107 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 U3.29-201ENST00000391296 212 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AL031679.1-201ENST00000400616 525 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM38O00635 TMSB10P2-201ENST00000416049 131 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 RWDD4P2-201ENST00000426392 563 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC006548.1-201ENST00000427470 102 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 RPS29P17-201ENST00000430795 166 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM38O00635 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM38O00635 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 RPL23AP93-201ENST00000440847 484 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 HSPE1P28-201ENST00000443139 211 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 CDC27P1-201ENST00000445384 715 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 EEF1E1P1-201ENST00000446998 430 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 TPT1P14-201ENST00000448018 505 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM38O00635 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM38O00635 RNU6-956P-201ENST00000458868 103 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 SNORD108-201ENST00000459332 71 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 snoU13.3-201ENST00000459441 104 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC126182.1-201ENST00000478134 357 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 HMGB1P36-201ENST00000487709 576 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AL024509.2-201ENST00000493462 493 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC025164.1-201ENST00000496249 478 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC004069.2-201ENST00000505438 1114 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 PPBPP1-201ENST00000510807 373 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC114781.4-201ENST00000513707 639 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 FABP5P5-201ENST00000515537 406 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC008694.2-201ENST00000517591 306 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms