Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 OTUD4P1-201ENST00000237841 3067 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AC244517.1-201ENST00000606030 2086 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 Y_RNA.192-201ENST00000363977 102 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 Y_RNA.311-201ENST00000365068 96 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 RNU6-1242P-201ENST00000391052 103 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 RNA5SP31-201ENST00000411144 127 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 TIMM9P2-201ENST00000419324 266 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AL049610.1-201ENST00000423374 372 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC188H7C350 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC188H7C350 RSL24D1P6-201ENST00000426934 401 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 USP9YP11-201ENST00000427537 717 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC188H7C350 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC188H7C350 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC188H7C350 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC188H7C350 MTND2P20-201ENST00000440805 661 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AL357552.1-201ENST00000445254 415 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 RPL21P134-201ENST00000453468 483 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 RPL21P104-201ENST00000464143 478 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 RPL31P13-201ENST00000484151 370 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 AC114981.1-201ENST00000503897 678 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 WBP1LP4-201ENST00000505043 344 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 SNORA31.9-201ENST00000516429 84 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC188H7C350 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC188H7C350 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC188H7C350 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC188H7C350 AC025884.1-201ENST00000556034 378 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AC009712.1-201ENST00000564938 316 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AC023575.1-201ENST00000580510 358 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 CCDC58P3-201ENST00000590792 430 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AL590392.1-201ENST00000604960 446 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AC010738.1-201ENST00000604970 987 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AC006270.3-201ENST00000605967 1036 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AL590282.1-201ENST00000610379 1136 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC188H7C350 AL357559.1-201ENST00000622228 274 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AL078595.3-201ENST00000623815 1166 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 AC091925.2-201ENST00000625059 256 ntBASIC3.74□□□□□ -1.81
CCDC188H7C350 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC188H7C350 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC188H7C350 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC188H7C350 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC188H7C350 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC188H7C350 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 SKINT1L-201ENST00000401057 817 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AC068533.2-201ENST00000411872 306 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 MTATP6P27-201ENST00000416987 621 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC188H7C350 AL139421.1-201ENST00000423010 169 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AP000907.1-201ENST00000428428 510 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AC091153.1-201ENST00000466297 402 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 RN7SL594P-201ENST00000470590 287 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 ST13P14-201ENST00000474095 734 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 MTCO3P35-201ENST00000485582 781 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AP000563.1-201ENST00000490865 758 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 TMEM251P1-201ENST00000503717 318 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 USP9YP5-201ENST00000511770 630 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 CYCSP30-201ENST00000546447 172 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AC053481.3-201ENST00000577881 843 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AC245036.5-201ENST00000596330 847 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AL450336.1-201ENST00000605180 586 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 RNU1-30P-201ENST00000606575 163 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AC068831.8-201ENST00000620171 435 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC188H7C350 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 AP001486.2-201ENST00000561652 5113 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms