Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SMKR1H3BMG3 SNRPEP3-201ENST00000338402 276 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 MIR135A2-201ENST00000384854 100 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AL133270.1-201ENST00000402635 279 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 PPIAP31-201ENST00000405422 495 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 RPL21P65-201ENST00000406094 466 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 U3.39-201ENST00000408569 239 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.57□□□□□ -2
SMKR1H3BMG3 RPS27AP7-201ENST00000422792 455 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AL590233.1-201ENST00000430017 456 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.57□□□□□ -2
SMKR1H3BMG3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.57□□□□□ -2
SMKR1H3BMG3 GTF2IP7-202ENST00000436677 309 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 FTH1P1-201ENST00000437933 532 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC092427.1-201ENST00000439177 601 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AL357552.1-201ENST00000445254 415 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.57□□□□□ -2
SMKR1H3BMG3 HMGN1P5-201ENST00000448591 263 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC125238.1-201ENST00000448842 249 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AC016724.1-201ENST00000453215 421 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 OFD1P3Y-201ENST00000453312 783 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC2.57□□□□□ -2
SMKR1H3BMG3 RPS15AP17-201ENST00000470598 390 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC108860.1-201ENST00000484521 383 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 VN1R105P-201ENST00000486595 910 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 CAB39P1-201ENST00000502277 460 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC008427.1-201ENST00000503102 655 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.57□□□□□ -2
SMKR1H3BMG3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 SNORA64.4-201ENST00000516632 81 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 RNU6-1028P-201ENST00000517164 93 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AP003730.1-201ENST00000524605 285 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.57□□□□□ -2
SMKR1H3BMG3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 DNAJC8P1-201ENST00000554535 372 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.57□□□□□ -2
SMKR1H3BMG3 MIR4637-201ENST00000582405 84 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AL390838.2-201ENST00000602394 274 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC068620.3-201ENST00000602749 560 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC080013.4-201ENST00000607624 649 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC211433.2-201ENST00000608433 387 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AL049539.1-201ENST00000611964 459 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AL450489.1-201ENST00000612071 468 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC253576.2-201ENST00000618815 580 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC018816.2-201ENST00000621460 353 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.57□□□□□ -2
SMKR1H3BMG3 AP003485.1-201ENST00000625093 753 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 AC107982.1-201ENST00000507171 1300 ntBASIC2.57□□□□□ -2
SMKR1H3BMG3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.57□□□□□ -2
SMKR1H3BMG3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.57□□□□□ -2
SMKR1H3BMG3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SMKR1H3BMG3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMKR1H3BMG3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMKR1H3BMG3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMKR1H3BMG3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SMKR1H3BMG3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMKR1H3BMG3 CD24P4-201ENST00000382840 243 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.56□□□□□ -2
SMKR1H3BMG3 SNORA40.4-201ENST00000390971 128 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 SKINT1L-201ENST00000401057 817 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AL356131.1-201ENST00000405826 414 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AL450338.1-201ENST00000407987 512 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 RNA5SP31-201ENST00000411144 127 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.56□□□□□ -2
SMKR1H3BMG3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 PTP4A1P7-201ENST00000423476 514 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC007742.1-201ENST00000425789 329 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.56□□□□□ -2
SMKR1H3BMG3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 ELOCP26-201ENST00000436067 329 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 USP9YP22-201ENST00000438971 294 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AC005297.2-201ENST00000450430 606 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AL353691.1-201ENST00000451332 387 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.56□□□□□ -2
SMKR1H3BMG3 UBDP1-202ENST00000457888 382 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.56□□□□□ -2
SMKR1H3BMG3 AC104164.3-201ENST00000467363 1258 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC090453.1-201ENST00000495560 436 ntBASIC2.56□□□□□ -2
SMKR1H3BMG3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.56□□□□□ -2
SMKR1H3BMG3 KCTD9P5-201ENST00000504141 1170 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms