Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF285B-201ENST00000561698 1767 ntBASIC3.5□□□□□ -1.85
NPIPA3F8WFD2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPIPA3F8WFD2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPIPA3F8WFD2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.5□□□□□ -1.85
NPIPA3F8WFD2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 FAM133CP-201ENST00000332869 704 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 SNORA71.3-201ENST00000362582 128 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 RNU6-335P-201ENST00000364563 113 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 SNORA73.2-201ENST00000364946 201 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 RPS24P7-201ENST00000416921 246 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 XKRYP1-201ENST00000423438 492 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 XKRYP2-201ENST00000432915 492 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 MTND4P6-201ENST00000438297 472 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC083863.1-201ENST00000438811 231 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 RPL26P28-201ENST00000451325 435 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 HMGN2P7-201ENST00000456186 273 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC087312.1-201ENST00000471411 480 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC090453.1-201ENST00000495560 436 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC078918.1-201ENST00000498515 228 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC114981.1-201ENST00000503897 678 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC104090.1-201ENST00000506341 1171 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC006390.1-201ENST00000508068 283 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 HMGN1P11-201ENST00000508668 303 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 RNU5A-4P-201ENST00000516588 111 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 EEF1A1P37-201ENST00000522748 715 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AP004371.1-201ENST00000525240 214 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 MTCYBP41-201ENST00000528913 1123 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 AC244100.1-202ENST00000621554 382 ntBASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPIPA3F8WFD2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 RNU4-28P-201ENST00000364739 141 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 U8.11-201ENST00000384699 133 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 U8.12-201ENST00000384701 133 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 MIR449B-201ENST00000384995 97 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 RPL23AP29-201ENST00000397284 453 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 ATP5F1P4-201ENST00000397288 746 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 USP9YP33-201ENST00000412220 421 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC092447.6-201ENST00000414578 210 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AL139247.1-201ENST00000422768 325 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AL049610.1-201ENST00000423374 372 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC006946.1-201ENST00000429106 328 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 YME1L1P1-201ENST00000429435 297 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 USP9YP35-201ENST00000435696 412 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 U8.18-201ENST00000459285 133 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC034244.1-201ENST00000507687 207 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 RNU1-95P-201ENST00000516357 160 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 RNU1-128P-201ENST00000516704 160 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC087369.1-201ENST00000520775 996 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 MTATP6P24-201ENST00000576835 677 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 XIAPP1-201ENST00000603162 600 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC004987.4-201ENST00000603383 338 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC103710.3-201ENST00000608157 948 ntBASIC3.48□□□□□ -1.85
NPIPA3F8WFD2 AC063944.3-201ENST00000609969 533 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms