Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MBD3L4A6NDZ8 AC012020.1-201ENST00000624541 1728 ntBASIC4.2□□□□□ -1.74
MBD3L4A6NDZ8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
MBD3L4A6NDZ8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.2□□□□□ -1.74
MBD3L4A6NDZ8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.2□□□□□ -1.74
MBD3L4A6NDZ8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.2□□□□□ -1.74
MBD3L4A6NDZ8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.2□□□□□ -1.74
MBD3L4A6NDZ8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 OR4G2P-201ENST00000328113 903 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 RNU6-1279P-201ENST00000383917 103 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 SNORA20.2-201ENST00000383922 131 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 SNORA5.1-201ENST00000384275 131 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AL590762.2-201ENST00000395798 571 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 RPL17P50-201ENST00000396131 546 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 MTND3P17-201ENST00000416968 344 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 RPL23AP1-201ENST00000428990 471 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC073464.1-201ENST00000429823 534 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 MTND3P21-201ENST00000433774 331 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AL136380.1-201ENST00000447970 162 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 PSPHP1-201ENST00000450062 261 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 MTND1P12-201ENST00000455231 147 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC108059.3-201ENST00000456388 214 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC025164.1-201ENST00000496249 478 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 FTH1P21-201ENST00000512179 511 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC026801.2-201ENST00000515352 425 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 RNU6-1095P-201ENST00000516148 108 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC124947.2-202ENST00000552735 133 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 OR4T1P-201ENST00000554933 911 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC074050.1-201ENST00000563247 211 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 MIR4715-201ENST00000584117 79 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AP001429.1-201ENST00000602568 530 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 RBM11P1-201ENST00000604951 799 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC006338.1-201ENST00000618453 749 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 AC244258.1-201ENST00000637553 1071 ntBASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD3L4A6NDZ8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 OR56B2P-202ENST00000641377 2453 ntBASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 RNU4-1-201ENST00000363925 141 ntBASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 RNY1P12-201ENST00000364251 105 ntBASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 SNORA71.2-201ENST00000364941 134 ntBASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 RNU6-432P-201ENST00000384196 109 ntBASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 MIR181A1-201ENST00000385026 110 ntBASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 BEND7P1-201ENST00000422058 457 ntBASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD3L4A6NDZ8 AC245028.2-201ENST00000458673 253 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms