Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 AKAP17BP-201ENST00000431706 2719 ntBASIC4.7□□□□□ -1.66
U3KQE9 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 Y_RNA.29-201ENST00000362570 113 ntBASIC4.7□□□□□ -1.66
U3KQE9 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.7□□□□□ -1.66
U3KQE9 RNA5SP77-201ENST00000365394 120 ntBASIC4.7□□□□□ -1.66
U3KQE9 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 Y_RNA.416-201ENST00000384014 113 ntBASIC4.7□□□□□ -1.66
U3KQE9 RNU6-746P-201ENST00000384112 109 ntBASIC4.7□□□□□ -1.66
U3KQE9 RNU6-45P-201ENST00000384471 107 ntBASIC4.7□□□□□ -1.66
U3KQE9 MIR551B-201ENST00000384984 96 ntBASIC4.7□□□□□ -1.66
U3KQE9 MIR625-201ENST00000385047 85 ntBASIC4.7□□□□□ -1.66
U3KQE9 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 RNA5SP178-201ENST00000410380 128 ntBASIC4.7□□□□□ -1.66
U3KQE9 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.7□□□□□ -1.66
U3KQE9 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.7□□□□□ -1.66
U3KQE9 CEACAMP1-201ENST00000434624 1035 ntBASIC4.7□□□□□ -1.66
U3KQE9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.7□□□□□ -1.66
U3KQE9 GAPDHP27-201ENST00000447427 1020 ntBASIC4.7□□□□□ -1.66
U3KQE9 AC234775.1-201ENST00000454247 670 ntBASIC4.7□□□□□ -1.66
U3KQE9 PCMTD1P1-201ENST00000455560 355 ntBASIC4.7□□□□□ -1.66
U3KQE9 AC091180.1-201ENST00000462104 372 ntBASIC4.7□□□□□ -1.66
U3KQE9 RPL7P23-201ENST00000493874 747 ntBASIC4.7□□□□□ -1.66
U3KQE9 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.7□□□□□ -1.66
U3KQE9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.7□□□□□ -1.66
U3KQE9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.7□□□□□ -1.66
U3KQE9 RN7SKP67-201ENST00000515905 235 ntBASIC4.7□□□□□ -1.66
U3KQE9 RN7SKP70-201ENST00000516655 271 ntBASIC4.7□□□□□ -1.66
U3KQE9 Y_RNA.710-201ENST00000516975 110 ntBASIC4.7□□□□□ -1.66
U3KQE9 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.7□□□□□ -1.66
U3KQE9 AC144568.1-201ENST00000520139 137 ntBASIC4.7□□□□□ -1.66
U3KQE9 AC036111.2-201ENST00000533247 901 ntBASIC4.7□□□□□ -1.66
U3KQE9 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.7□□□□□ -1.66
U3KQE9 AC008555.7-201ENST00000605008 583 ntBASIC4.7□□□□□ -1.66
U3KQE9 AL158032.1-201ENST00000605401 106 ntBASIC4.7□□□□□ -1.66
U3KQE9 AC141002.1-201ENST00000607025 279 ntBASIC4.7□□□□□ -1.66
U3KQE9 AC015982.1-201ENST00000608113 465 ntBASIC4.7□□□□□ -1.66
U3KQE9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.7□□□□□ -1.66
U3KQE9 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 AC093849.1-201ENST00000563631 2209 ntBASIC4.7□□□□□ -1.66
U3KQE9 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
U3KQE9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
U3KQE9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
U3KQE9 AL359976.1-201ENST00000418655 3528 ntBASIC4.69□□□□□ -1.66
U3KQE9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
U3KQE9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
U3KQE9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.69□□□□□ -1.66
U3KQE9 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
U3KQE9 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
U3KQE9 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
U3KQE9 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
U3KQE9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.69□□□□□ -1.66
U3KQE9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
U3KQE9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
U3KQE9 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
U3KQE9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
U3KQE9 SNORA64.3-201ENST00000365647 134 ntBASIC4.69□□□□□ -1.66
U3KQE9 GNG5P2-201ENST00000372054 207 ntBASIC4.69□□□□□ -1.66
U3KQE9 Y_RNA.477-201ENST00000384352 108 ntBASIC4.69□□□□□ -1.66
U3KQE9 RNU11-4P-201ENST00000391149 133 ntBASIC4.69□□□□□ -1.66
U3KQE9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
U3KQE9 RPS23P10-201ENST00000416185 486 ntBASIC4.69□□□□□ -1.66
U3KQE9 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.69□□□□□ -1.66
U3KQE9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.69□□□□□ -1.66
U3KQE9 AC013403.1-201ENST00000436954 263 ntBASIC4.69□□□□□ -1.66
U3KQE9 PTMAP6-201ENST00000439110 327 ntBASIC4.69□□□□□ -1.66
U3KQE9 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.69□□□□□ -1.66
U3KQE9 Z83838.1-202ENST00000456225 839 ntBASIC4.69□□□□□ -1.66
U3KQE9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.69□□□□□ -1.66
U3KQE9 RNU7-187P-201ENST00000458985 68 ntBASIC4.69□□□□□ -1.66
U3KQE9 RN7SL352P-201ENST00000466002 277 ntBASIC4.69□□□□□ -1.66
U3KQE9 RPL7P5-201ENST00000471472 736 ntBASIC4.69□□□□□ -1.66
U3KQE9 TRBVB-201ENST00000477100 408 ntBASIC4.69□□□□□ -1.66
U3KQE9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.69□□□□□ -1.66
U3KQE9 AC090958.1-201ENST00000511122 351 ntBASIC4.69□□□□□ -1.66
U3KQE9 ERHP1-201ENST00000523006 310 ntBASIC4.69□□□□□ -1.66
U3KQE9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.69□□□□□ -1.66
U3KQE9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.69□□□□□ -1.66
U3KQE9 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.69□□□□□ -1.66
U3KQE9 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.69□□□□□ -1.66
U3KQE9 CR383656.7-201ENST00000548164 174 ntBASIC4.69□□□□□ -1.66
U3KQE9 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.69□□□□□ -1.66
U3KQE9 HMGN1P26-201ENST00000558737 303 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms