Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 NANOGP2-201ENST00000435391 727 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 EEF1A1P39-201ENST00000440791 250 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 PTGES3P5-201ENST00000455109 434 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 snoU109.4-201ENST00000458953 143 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC108078.3-201ENST00000502633 489 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC093767.1-201ENST00000504523 156 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 HMGN1P11-201ENST00000508668 303 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 MTCYBP16-201ENST00000509187 1129 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-1261P-201ENST00000517194 104 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC109635.4-202ENST00000531666 412 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC090502.2-201ENST00000549267 280 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC008127.2-201ENST00000549925 1075 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC138915.2-201ENST00000569776 97 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 MIR92B-201ENST00000607575 96 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC027449.1-201ENST00000608890 407 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC231759.1-201ENST00000616455 597 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC048347.1-201ENST00000624621 427 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC244205.2-202ENST00000635781 342 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 LINC02211-204ENST00000642024 1070 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 PRO1804-201ENST00000623780 2050 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC004925.1-201ENST00000624256 2706 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-283P-201ENST00000364788 107 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 SNORA73.2-201ENST00000364946 201 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-328P-201ENST00000390887 106 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-584P-201ENST00000410350 95 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 RNU2-28P-201ENST00000410457 189 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL161449.1-201ENST00000414531 1199 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL035423.1-201ENST00000420331 213 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL389915.1-201ENST00000422463 466 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC127537.2-201ENST00000439258 465 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 VN1R34P-201ENST00000447387 883 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC092155.2-201ENST00000454675 477 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 RPS20P24-201ENST00000457473 361 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 snoU13.24-201ENST00000458998 104 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC005410.1-202ENST00000460347 485 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC108734.3-201ENST00000481241 1165 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 RPL23AP44-201ENST00000482216 473 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 OR4G11P-201ENST00000492842 939 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 RPL7P47-201ENST00000497299 556 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 IGKV2-23-201ENST00000518729 323 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC087808.1-201ENST00000520501 361 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL121576.1-201ENST00000556055 276 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 MIR4444-1-201ENST00000581696 74 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 MIR4444-2-201ENST00000584390 74 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 RPL23AP92-201ENST00000603609 255 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC021749.1-201ENST00000604322 607 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC006077.1-201ENST00000604746 343 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL590282.1-201ENST00000610379 1136 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL138478.1-201ENST00000612252 832 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 CYP3A51P-201ENST00000633513 256 ntBASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4BQ9Y4P1 AC244517.1-201ENST00000606030 2086 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms