Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC023421.1-201ENST00000590535 1785 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 MIR558-201ENST00000384920 94 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 U3.20-201ENST00000390909 217 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 RN7SKP247-201ENST00000411094 308 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 RPL31P45-201ENST00000419532 356 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AL590609.2-201ENST00000421430 368 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 CHIAP3-201ENST00000423668 1133 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AL590233.1-201ENST00000430017 456 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 MTATP6P16-201ENST00000434543 526 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 FTH1P1-201ENST00000437933 532 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 HMGB3P22-202ENST00000451823 572 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC016724.1-201ENST00000453215 421 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 RNU7-180P-201ENST00000459240 63 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 FTH1P21-201ENST00000512179 511 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 OR4P1P-201ENST00000530808 1136 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AP000889.2-201ENST00000532684 490 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC128657.1-201ENST00000549459 145 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 RPL21P12-201ENST00000559810 515 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 RPL23AP92-201ENST00000603609 255 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AL162431.4-201ENST00000604674 411 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC011626.1-201ENST00000604710 562 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC103710.2-201ENST00000609912 942 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC007546.1-201ENST00000619452 559 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 CYP4F35P-202ENST00000636121 390 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 OR9K1P-202ENST00000641111 3217 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC011460.1-201ENST00000636268 1834 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 RBPJP2-201ENST00000618187 1444 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 RN7SKP160-201ENST00000363804 340 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 SNORA62.1-201ENST00000364287 154 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 RNY3P13-201ENST00000365542 102 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 MIR589-201ENST00000385238 99 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 CFL1P1-202ENST00000432948 411 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 MRPS31P2-201ENST00000451581 518 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 ELOCP24-201ENST00000456370 334 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AC083904.1-201ENST00000487828 231 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AL049874.2-201ENST00000492636 288 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AC098976.1-201ENST00000513014 541 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 BX510359.5-201ENST00000515651 304 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 RNU6-264P-201ENST00000517134 104 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 MIR4680-201ENST00000580906 66 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 RN7SL708P-201ENST00000580952 299 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 MIR4775-201ENST00000581168 75 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AC109309.2-201ENST00000612597 332 ntBASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AP4E1Q9UPM8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
AP4E1Q9UPM8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
AP4E1Q9UPM8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
AP4E1Q9UPM8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
AP4E1Q9UPM8 AL022311.1-201ENST00000623726 19416 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC092747.4-201ENST00000620519 1861 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 HSPE1P11-201ENST00000339579 310 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RNA5SP183-201ENST00000362452 119 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RNU6-1188P-201ENST00000363795 107 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms