Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MRPL48P1-201ENST00000445390 636 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL162151.2-201ENST00000448875 158 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 ABCF2P2-201ENST00000450549 296 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC079776.3-201ENST00000450665 370 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC105918.1-201ENST00000474399 838 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC022336.1-201ENST00000475510 337 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL132838.2-201ENST00000492041 314 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC009646.1-201ENST00000510455 318 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC109445.1-201ENST00000512356 383 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 GTF2IP22-201ENST00000554443 182 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL355836.1-201ENST00000555951 870 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL606490.9-201ENST00000603331 271 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC103881.1-201ENST00000603476 538 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC007179.3-201ENST00000604976 235 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MIR7151-201ENST00000617477 60 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AP003122.6-201ENST00000623831 495 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC087821.2-201ENST00000637086 450 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 RNU6-839P-201ENST00000363347 108 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.133-201ENST00000363428 110 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 SNORD65C-201ENST00000390962 71 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.582-201ENST00000391023 95 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 NDUFB4P4-201ENST00000404822 243 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC093578.1-201ENST00000415219 368 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC022364.2-201ENST00000457963 554 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 VN1R105P-201ENST00000486595 910 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 HMGN1P13-201ENST00000505795 138 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC105914.1-201ENST00000511798 226 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AP001893.2-201ENST00000526949 202 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AK6P1-201ENST00000540219 478 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC093012.1-202ENST00000549403 582 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 MIR3668-201ENST00000582138 75 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC012254.4-201ENST00000588843 273 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 BNIP3P26-201ENST00000600827 554 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 VN1R107P-201ENST00000601784 209 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 SEPT7P9-203ENST00000604116 343 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC012468.1-201ENST00000604888 430 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC012360.2-201ENST00000609349 391 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC099669.2-201ENST00000616549 437 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC006065.6-201ENST00000625201 545 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC117529.2-201ENST00000512159 2068 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 RNU6-253P-201ENST00000384730 105 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 MIR1271-201ENST00000408537 86 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC009237.2-201ENST00000421358 284 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 SDCBPP1-201ENST00000440192 890 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 BUD31P2-201ENST00000449374 300 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 HMGB1P5-202ENST00000451497 985 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AL121877.1-201ENST00000453704 622 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 PMCHL2-203ENST00000457791 237 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC104164.2-201ENST00000496953 495 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 KCTD9P2-201ENST00000512203 1013 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms