Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RNA5SP258-201ENST00000362750 119 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RNA5SP90-201ENST00000364801 99 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 Y_RNA.460-201ENST00000384255 102 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RNU6-171P-201ENST00000384354 107 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 SNORA67-201ENST00000384423 137 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AL354719.1-201ENST00000406535 843 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC108734.1-201ENST00000439549 399 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC104651.2-201ENST00000447549 528 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AL445433.1-201ENST00000457507 257 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 COPS8P2-201ENST00000473228 627 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RN7SL214P-201ENST00000487317 265 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC093278.1-201ENST00000494700 600 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RPS4XP20-201ENST00000505751 772 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC006427.1-201ENST00000514359 712 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 SCARNA15.1-201ENST00000516384 125 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AP003497.1-201ENST00000528472 562 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 OR4T1P-201ENST00000554933 911 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC124068.1-201ENST00000563131 678 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RN7SL708P-201ENST00000580952 299 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC060771.1-201ENST00000582031 164 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC098848.2-201ENST00000588023 330 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 VN1R80P-201ENST00000597126 338 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 MIR6837-201ENST00000620884 64 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 AC100810.6-201ENST00000638068 285 ntBASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRPF3Q9ULD4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 Z95331.1-201ENST00000623075 23112 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 SNORA51.1-201ENST00000363243 140 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 Y_RNA.166-201ENST00000363730 102 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 MIR1-2-201ENST00000384961 85 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 U3.20-201ENST00000390909 217 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AL356432.1-201ENST00000405809 419 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 EIF2AP4-201ENST00000424793 1781 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC093655.2-201ENST00000425735 631 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC137499.1-201ENST00000427602 88 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 RPL36AP53-201ENST00000432891 316 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC079781.2-201ENST00000446424 169 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 RPS21P4-201ENST00000487122 248 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AK3P4-201ENST00000504283 583 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 MTCO3P9-201ENST00000506989 781 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC037471.2-201ENST00000564941 598 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 HMGB2P1-201ENST00000591146 634 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AL132765.2-201ENST00000610812 351 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AL512624.1-201ENST00000613638 469 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC233309.1-201ENST00000619522 751 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC074101.1-201ENST00000637861 241 ntBASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRPF3Q9ULD4 AC011460.1-201ENST00000636268 1834 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 MTCO1P11-201ENST00000429111 1528 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 RN7SKP153-201ENST00000365026 316 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 SNORD82-201ENST00000365530 70 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AL591416.1-201ENST00000404015 867 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms