Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RNU6-984P-201ENST00000363236 109 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 SDCBPP3-201ENST00000419629 891 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AC104389.3-201ENST00000445629 235 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AC132942.1-201ENST00000486753 483 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 RNA5SP281-201ENST00000516504 135 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AC021269.2-201ENST00000532318 330 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 OR11H5P-201ENST00000554039 926 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AL034379.1-201ENST00000423216 253 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 RN7SL499P-201ENST00000481141 276 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 RN7SKP31-201ENST00000516354 278 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 RANP3-201ENST00000530970 276 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AC025260.1-201ENST00000548858 430 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AC022884.3-201ENST00000579571 248 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 AC117529.2-201ENST00000512159 2068 ntBASIC3.22□□□□□ -1.89
PHRF1Q9P1Y6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.89
PHRF1Q9P1Y6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
PHRF1Q9P1Y6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 AC103975.1-201ENST00000482506 483 ntBASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 AC046143.2-201ENST00000609789 160 ntBASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 AC009318.2-201ENST00000610917 651 ntBASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 AC091564.4-201ENST00000533934 2194 ntBASIC3.21□□□□□ -1.9
PHRF1Q9P1Y6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 RNU6-253P-201ENST00000384730 105 ntBASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 RNU2-22P-201ENST00000411266 212 ntBASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 AC066616.2-201ENST00000559334 1481 ntBASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 BNIP3P8-201ENST00000597863 560 ntBASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PHRF1Q9P1Y6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 SNORA51.4-201ENST00000364993 124 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AL606490.7-201ENST00000433136 191 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AC013410.1-201ENST00000436223 1232 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AC016727.1-205ENST00000605437 569 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 OR4G2P-202ENST00000641004 1759 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 FAT1P1-201ENST00000406588 507 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AL158825.1-201ENST00000414735 521 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AC018634.1-201ENST00000437554 401 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 COX6CP2-201ENST00000444980 225 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 RPL9P33-201ENST00000484311 566 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AC026436.1-201ENST00000510537 270 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 VN1R79P-201ENST00000593540 513 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 MIR6873-201ENST00000622788 63 ntBASIC3.19□□□□□ -1.9
PHRF1Q9P1Y6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 AL161781.1-201ENST00000354277 403 ntBASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 Y_RNA.164-201ENST00000363709 102 ntBASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms