Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 OR4A45P-201ENST00000529954 901 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC007536.1-201ENST00000533382 349 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC011611.1-201ENST00000552179 197 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AL121603.1-201ENST00000553815 142 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC087481.2-201ENST00000565492 330 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AL513477.2-201ENST00000607858 568 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC007318.2-201ENST00000620999 243 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC092435.3-201ENST00000565538 3654 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RNU1-85P-201ENST00000364127 164 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RNU1-64P-201ENST00000365443 163 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RNU6-761P-201ENST00000384148 107 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 SNORD15B-201ENST00000384714 146 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 MIR887-201ENST00000401258 79 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RPL7P25-201ENST00000404151 721 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 MTCO3P12-201ENST00000416718 547 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC096632.1-201ENST00000427395 310 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC093151.1-201ENST00000427711 313 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC104332.2-201ENST00000429959 156 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC011242.1-201ENST00000433596 1158 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 GAPDHP27-201ENST00000447427 1020 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 BX248409.1-201ENST00000455497 255 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RN7SL863P-201ENST00000462370 296 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 HMGB1P25-201ENST00000468402 607 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RPL21P18-201ENST00000469899 480 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RPS23P3-201ENST00000470993 430 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RN7SL293P-201ENST00000481765 281 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RNU6-751P-201ENST00000516382 101 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC023632.4-201ENST00000517783 191 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 HIGD1AP6-201ENST00000521833 279 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC239860.2-201ENST00000525886 270 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC004217.3-201ENST00000551552 878 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 NCAPGP2-201ENST00000557911 754 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 RN7SL339P-201ENST00000580597 296 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 UBL5P2-201ENST00000583788 219 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC083760.1-201ENST00000589621 670 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC012119.1-201ENST00000603184 222 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 DPRXP5-201ENST00000604662 539 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AL110115.1-201ENST00000614396 364 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC090116.1-201ENST00000615679 446 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC018755.4-201ENST00000619715 454 ntBASIC2.86□□□□□ -1.95
VAPAQ9P0L0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
VAPAQ9P0L0 AC093908.1-201ENST00000623125 8092 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 RNU6-1249P-201ENST00000363237 111 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 MIR525-201ENST00000384978 85 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 RNU4-65P-201ENST00000410473 140 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 BMS1P22-201ENST00000414726 313 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 CR848007.2-201ENST00000424918 787 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC093422.3-201ENST00000428506 305 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC006499.5-201ENST00000505037 514 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 RNU6-711P-201ENST00000517255 106 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC093227.2-201ENST00000589357 285 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 KATNBL1P1-201ENST00000605192 748 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC112503.2-201ENST00000609005 552 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AP001033.2-201ENST00000609701 1003 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC099506.2-201ENST00000623074 221 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AC018692.3-201ENST00000623929 123 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms