Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AP002906.1-201ENST00000603405 233 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AL021368.1-201ENST00000607490 540 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AL450489.1-201ENST00000612071 468 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AL110115.1-201ENST00000614396 364 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AC018755.4-201ENST00000619715 454 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 U4.6-201ENST00000621618 127 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AL392088.2-201ENST00000637607 285 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AC024341.1-201ENST00000526444 1552 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
KLHL28Q9NXS3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 RPS3AP26-201ENST00000398259 784 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AL121978.1-201ENST00000402778 359 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 GLRXP1-201ENST00000423261 334 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 RPL7P46-201ENST00000425129 740 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AL159987.2-201ENST00000432754 307 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 SNRPEP4-201ENST00000435815 279 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AL590762.3-201ENST00000436372 640 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 HSPE1P28-201ENST00000443139 211 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 GXYLT1P1-201ENST00000446657 490 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 RPL36AP33-201ENST00000450395 310 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 MRPS31P2-201ENST00000451581 518 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC097262.1-201ENST00000452559 548 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC008379.1-201ENST00000463655 464 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 COL6A4P2-205ENST00000509855 506 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AP001636.2-201ENST00000525517 696 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC011602.1-201ENST00000546484 331 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 OR4H12P-201ENST00000556269 907 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 SNORD39.3-201ENST00000584451 71 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC020914.6-201ENST00000594327 272 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 XIAPP1-201ENST00000603162 600 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC009948.4-201ENST00000604692 675 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC008962.1-201ENST00000605729 304 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC073968.1-201ENST00000618594 637 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 AC090897.3-201ENST00000636973 1157 ntBASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL28Q9NXS3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 RNA5SP50-201ENST00000363731 107 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 RNVU1-14-201ENST00000384770 164 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 PTGES3P2-201ENST00000407942 482 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 KRR1P1-201ENST00000419430 803 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 BX842559.1-201ENST00000419615 532 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 RPL31P12-201ENST00000422587 358 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 RPL17P35-201ENST00000432217 549 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AL050341.1-201ENST00000447743 313 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 OR51B8P-201ENST00000449892 769 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 RNU7-140P-201ENST00000459546 60 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 RPL32P14-201ENST00000463196 378 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 RPL6P9-201ENST00000466502 859 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 RPL23AP44-201ENST00000482216 473 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 WBP1LP4-201ENST00000505043 344 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 MTCYBP37-201ENST00000510642 1133 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 SNORA70.24-201ENST00000517233 118 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC004024.1-201ENST00000549244 247 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC087481.2-201ENST00000565492 330 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 SNORD84-203ENST00000584275 78 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms