Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL356218.2-201ENST00000605264 187 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC097065.2-201ENST00000608159 533 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC022149.2-201ENST00000621061 203 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC078883.4-201ENST00000623218 367 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC091152.2-201ENST00000591628 2569 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 RNVU1-6-201ENST00000364688 164 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC093578.1-201ENST00000415219 368 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC008280.1-201ENST00000418851 412 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC245291.1-201ENST00000419501 328 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 USP9YP26-201ENST00000421008 661 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 RPS27AP7-201ENST00000422792 455 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC005345.1-201ENST00000431868 217 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 UBE2D3P1-201ENST00000436669 444 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 MTCO2P25-201ENST00000447065 681 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AL034418.1-201ENST00000448675 860 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC022034.3-201ENST00000471393 478 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AP002884.2-201ENST00000471647 395 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 RPL7P18-201ENST00000478965 734 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC013356.1-201ENST00000489027 564 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 OR4G11P-201ENST00000492842 939 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 RPL5P23-201ENST00000496040 868 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC109445.1-201ENST00000512356 383 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 RNU6-488P-201ENST00000515918 99 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC008015.1-201ENST00000555505 465 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AGGF1P6-201ENST00000569213 976 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC022069.1-201ENST00000582910 658 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC006539.2-201ENST00000601729 572 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AL390838.2-201ENST00000602394 274 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AP003117.2-201ENST00000606010 545 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC011816.2-201ENST00000607089 556 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AL360219.1-201ENST00000610230 366 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 MKKS-204ENST00000639674 192 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AC012321.1-201ENST00000561622 1588 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 AP000526.1-201ENST00000603308 1388 ntBASIC3.49□□□□□ -1.85
NDE1Q9NXR1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDE1Q9NXR1 SGO1P2-201ENST00000429458 1589 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 RPL32P3-201ENST00000359025 275 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 RNA5SP383-201ENST00000362934 120 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 SUGT1P1-201ENST00000379514 476 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 SNORD116-2-201ENST00000384274 95 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 SNORD116-6-201ENST00000384711 96 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 RNU4-6P-201ENST00000410804 122 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC126124.2-201ENST00000413542 321 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC233981.1-201ENST00000423224 461 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL593851.1-201ENST00000426171 157 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL050321.1-201ENST00000432363 400 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC105402.2-201ENST00000438503 358 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 MTND5P2-201ENST00000442927 1142 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 HMGN1P18-201ENST00000457642 277 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 RNU7-125P-201ENST00000458760 62 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 RPL23AP67-201ENST00000465341 474 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC021205.2-201ENST00000480069 347 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC114967.1-201ENST00000504890 259 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 MTATP6P22-201ENST00000507369 598 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 HSPE1P23-201ENST00000509838 286 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC093840.1-201ENST00000511599 336 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC118465.1-201ENST00000513820 1271 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms