Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 OR8K2P-201ENST00000524645 927 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 MTCO3P24-201ENST00000572729 782 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 MTCO1P40-201ENST00000574371 625 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 SNORD39.3-201ENST00000584451 71 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AL133393.1-201ENST00000603277 287 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AL451074.6-201ENST00000608512 729 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC110774.1-201ENST00000623567 2018 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 RN7SKP280-201ENST00000364196 304 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 RNU6-115P-201ENST00000364310 107 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 RN7SKP227-201ENST00000364445 330 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 RNU6-619P-201ENST00000365146 108 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 SNORA5A-201ENST00000384111 134 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 GSTA8P-201ENST00000404253 637 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AL591034.1-201ENST00000407447 340 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC109780.2-201ENST00000413467 845 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 BX664727.1-201ENST00000416024 466 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 YPEL5P1-201ENST00000419731 367 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 RPL17P35-201ENST00000432217 549 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC127537.2-201ENST00000439258 465 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 RABEPKP1-201ENST00000440529 1026 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 RPL21P23-201ENST00000446654 460 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC010301.1-201ENST00000473936 355 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC017015.1-201ENST00000477387 286 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 POU5F1P7-201ENST00000508759 541 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 RNA5SP385-201ENST00000515947 110 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC019227.1-201ENST00000526902 510 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AP001029.3-201ENST00000588063 596 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AP002906.1-201ENST00000603405 233 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC026741.1-201ENST00000605892 482 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 MIR6748-201ENST00000610433 71 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AL121772.2-201ENST00000614331 297 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AL110115.1-201ENST00000614396 364 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AL590240.3-201ENST00000621416 943 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 AC243312.2-201ENST00000623340 601 ntBASIC2.87□□□□□ -1.95
CLN6Q9NWW5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.87□□□□□ -1.95
CLN6Q9NWW5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 MTCO2P31-201ENST00000402702 684 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 RN7SKP159-201ENST00000410657 292 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 SYF2P2-201ENST00000417620 583 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 HSPE1P1-201ENST00000421494 318 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 RPL21P40-201ENST00000428586 483 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 RPL23AP69-201ENST00000431134 458 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AL445584.1-201ENST00000431451 330 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 RPL23AP16-201ENST00000441715 421 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC078857.1-201ENST00000469870 667 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 RPS23P3-201ENST00000470993 430 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 COL6A4P2-205ENST00000509855 506 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC048346.1-201ENST00000510247 144 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC121161.1-201ENST00000510606 652 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 MTCYBP37-201ENST00000510642 1133 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 ZNF705CP-201ENST00000530515 889 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms