Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC068722.2-201ENST00000618734 544 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 PISRT1-201ENST00000626175 531 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 SALL4P2-201ENST00000423288 2910 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC107982.1-201ENST00000507171 1300 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC022893.2-201ENST00000564832 3296 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG3Q9NT62 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG3Q9NT62 AL731566.1-201ENST00000620490 1937 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG3Q9NT62 RNU6-619P-201ENST00000365146 108 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 SNORA4.3-201ENST00000365564 137 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 Y_RNA.381-201ENST00000365666 102 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 RNU6-809P-201ENST00000384461 107 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 RNA5SP118-201ENST00000410385 109 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 Y_RNA.608-201ENST00000410647 95 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 RPS27AP12-201ENST00000429552 465 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 RPL18AP17-201ENST00000455326 198 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC130509.1-201ENST00000464158 433 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 HMGB1P28-201ENST00000507778 552 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC112206.3-201ENST00000514578 389 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 IGLVIV-65-201ENST00000517313 360 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 FKBP1BP1-201ENST00000553366 325 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC011816.2-201ENST00000607089 556 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 AL445567.2-201ENST00000618935 498 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 AP005019.3-201ENST00000620418 560 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 MKKS-204ENST00000639674 192 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 AC021242.1-201ENST00000507315 2035 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG3Q9NT62 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.02□□□□□ -1.45
ATG3Q9NT62 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ATG3Q9NT62 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG3Q9NT62 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG3Q9NT62 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG3Q9NT62 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG3Q9NT62 AC125257.1-201ENST00000560400 2930 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG3Q9NT62 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 OR5P1P-201ENST00000299512 925 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 RNA5SP28-201ENST00000363841 119 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 RNU6-1318P-201ENST00000365389 103 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 SNORA33.2-201ENST00000365413 134 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 Y_RNA.422-201ENST00000384054 114 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 Y_RNA.474-201ENST00000384341 102 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AL445669.1-201ENST00000426743 755 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 RPS29P17-201ENST00000430795 166 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 HMGB3P12-201ENST00000438745 556 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AC132479.1-201ENST00000449160 144 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AC243772.1-201ENST00000451620 410 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 RNU6-264P-201ENST00000517134 104 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 AP000827.1-201ENST00000527814 258 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 TRAV15-201ENST00000556680 249 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 AC008638.3-201ENST00000603341 463 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 SNRPGP17-201ENST00000603780 214 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 AL133215.3-201ENST00000609801 448 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 MIR7973-1-201ENST00000614683 76 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 AP000843.1-201ENST00000624880 701 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG3Q9NT62 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG3Q9NT62 AC024560.2-201ENST00000507981 1497 ntBASIC6.01□□□□□ -1.45
ATG3Q9NT62 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG3Q9NT62 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG3Q9NT62 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATG3Q9NT62 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6□□□□□ -1.45
ATG3Q9NT62 DDX18P4-201ENST00000511690 1966 ntBASIC6□□□□□ -1.45
ATG3Q9NT62 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6□□□□□ -1.45
ATG3Q9NT62 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ATG3Q9NT62 OR4A15-201ENST00000314706 1035 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms