Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MTCYBP43-201ENST00000513621 740 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC087276.1-201ENST00000529659 480 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC100770.1-201ENST00000532310 322 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AL391156.1-201ENST00000554965 554 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 CYCSP2-201ENST00000558168 301 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AGGF1P4-201ENST00000568249 801 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MIR4444-1-201ENST00000581696 74 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MIR4444-2-201ENST00000584390 74 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MIR3611-201ENST00000584484 83 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC022146.1-201ENST00000595307 847 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MIR6891-201ENST00000618788 93 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 OR5P1P-201ENST00000299512 925 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 RNA5SP52-201ENST00000362448 134 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 RNU6-462P-201ENST00000362659 105 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 RNU6-878P-201ENST00000384578 110 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 MIR3065-201ENST00000390137 79 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC012065.2-201ENST00000421295 375 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 CYCSP46-201ENST00000423569 204 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 MTND1P34-201ENST00000438556 671 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AL512286.1-201ENST00000439244 400 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 SNRPGP9-201ENST00000456025 225 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 RPS4XP15-201ENST00000489210 795 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC004069.2-201ENST00000505438 1114 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 PCMTD1P2-201ENST00000565017 355 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC136618.2-201ENST00000575091 400 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AL669831.4-202ENST00000590817 238 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC080078.2-201ENST00000603766 501 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC087752.4-201ENST00000605911 462 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC104073.3-201ENST00000610942 955 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC243773.3-201ENST00000613270 256 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 MIR6075-201ENST00000620782 95 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS45Q9NRW7 CR383658.2-201ENST00000547576 1525 ntBASIC4.5□□□□□ -1.69
VPS45Q9NRW7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VPS45Q9NRW7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS45Q9NRW7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VPS45Q9NRW7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VPS45Q9NRW7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS45Q9NRW7 AC116096.1-201ENST00000566804 2314 ntBASIC4.49□□□□□ -1.69
VPS45Q9NRW7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS45Q9NRW7 RNU4-91P-201ENST00000364778 135 ntBASIC4.49□□□□□ -1.69
VPS45Q9NRW7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS45Q9NRW7 ARF4P3-201ENST00000397387 509 ntBASIC4.49□□□□□ -1.69
VPS45Q9NRW7 AL121972.1-201ENST00000402023 252 ntBASIC4.49□□□□□ -1.69
VPS45Q9NRW7 EI24P1-201ENST00000416584 867 ntBASIC4.49□□□□□ -1.69
VPS45Q9NRW7 AC004552.1-201ENST00000419089 348 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms