Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR3609-201ENST00000582661 80 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 MIR4664-201ENST00000583819 71 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC073657.2-201ENST00000605661 303 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC055876.5-201ENST00000605667 259 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 uc_338.29-201ENST00000615099 168 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 HMGB1P24-202ENST00000615653 685 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC073569.3-201ENST00000619055 682 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC009318.4-201ENST00000620496 486 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 MIR3653-201ENST00000625572 110 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC005336.3-201ENST00000623833 2679 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 HMGB1P5-201ENST00000255320 642 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNA5SP124-201ENST00000362739 110 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-1155P-201ENST00000363554 107 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-270P-201ENST00000364131 105 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNU4-52P-201ENST00000384209 138 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 SNORA57.1-201ENST00000391227 145 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNA5SP397-201ENST00000391323 118 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RPL21P17-201ENST00000397467 475 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AL589655.1-201ENST00000405398 482 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AL158825.1-201ENST00000414735 521 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 Z97055.1-201ENST00000419730 712 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC234781.2-201ENST00000426370 994 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC009414.1-201ENST00000427200 443 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 EZH2P1-201ENST00000431167 291 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 UBE2V2P3-201ENST00000433562 437 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RPL23AP74-201ENST00000437246 471 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 IPO7P1-201ENST00000442031 636 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNF2P1-201ENST00000442955 1010 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC104389.3-201ENST00000445629 235 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 WASF1P1-201ENST00000447560 1131 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 MTND2P6-201ENST00000455337 1030 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 snoU13.22-201ENST00000459428 104 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 OR2AO1P-201ENST00000476497 403 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RPL37P23-201ENST00000492641 294 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 SNRPCP2-201ENST00000504370 475 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC112198.1-201ENST00000505369 1220 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 HPRT1P1-201ENST00000509498 657 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-27P-201ENST00000516146 107 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 RNA5SP49-201ENST00000516450 115 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 GCSHP4-201ENST00000538792 439 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 HMGB1P6-201ENST00000569046 646 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 MIR3117-201ENST00000584034 78 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AL049829.3-202ENST00000604278 711 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC012443.1-201ENST00000605605 231 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC005828.7-201ENST00000607331 556 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC009090.3-201ENST00000616553 565 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AL031601.2-202ENST00000622650 282 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC012640.5-201ENST00000623897 319 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC073530.2-201ENST00000623987 261 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC091925.2-201ENST00000625059 256 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 ZNF663P-202ENST00000641770 1131 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AC008669.1-201ENST00000565823 2178 ntBASIC1.51□□□□□ -2.17
CDC42SE1Q9NRR8 AP004289.2-201ENST00000444413 1457 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 MTND5P11-201ENST00000511037 1812 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 AC009812.4-201ENST00000569134 1805 ntBASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CDC42SE1Q9NRR8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms