Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 RPL32P3-201ENST00000359025 275 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 RNA5SP456-201ENST00000364002 114 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 SNORA58B-201ENST00000364259 136 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 DEFB109C-201ENST00000382575 264 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 DEFB109B-201ENST00000382656 264 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 RNU6ATAC-201ENST00000408749 126 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AL513331.1-201ENST00000411908 397 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AL158825.1-201ENST00000414735 521 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 PSMA2P3-201ENST00000429685 675 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 MYL8P-204ENST00000431574 518 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 TRBV26-201ENST00000456572 344 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 RPL23AP49-201ENST00000492925 468 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 ANP32BP3-201ENST00000559213 706 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 RPS15AP11-201ENST00000594193 385 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 SNRPGP15-201ENST00000600149 222 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AC245389.1-201ENST00000605141 529 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AC009090.3-201ENST00000616553 565 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AL031601.2-202ENST00000622650 282 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 CU459211.1-201ENST00000635667 749 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 AC010680.1-201ENST00000590024 3590 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC090740.1-201ENST00000623193 2262 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 RNU1-85P-201ENST00000364127 164 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 RNU4-72P-201ENST00000410754 173 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 RPL21P66-201ENST00000426566 466 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC016712.1-201ENST00000431088 378 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC025768.1-201ENST00000510057 267 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 RNA5SP471-201ENST00000516971 106 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 RN7SKP234-201ENST00000517173 224 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 RN7SKP57-201ENST00000517248 293 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 MTCYBP41-201ENST00000528913 1123 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 NDUFS5P6-201ENST00000529136 295 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC007458.1-201ENST00000542812 373 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC007954.1-201ENST00000554198 494 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AMZ2P1-203ENST00000565833 850 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC067959.1-201ENST00000604334 379 ntBASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMCO4Q9NRQ5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AC245052.5-201ENST00000416320 649 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AL137014.1-201ENST00000420490 1226 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 RPL37P6-202ENST00000464216 403 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 NDUFA5P9-201ENST00000472609 340 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 RPS27P21-201ENST00000486977 252 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 OR5AK3P-201ENST00000527486 1297 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 H3F3AP1-201ENST00000559984 334 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AL161912.3-201ENST00000605404 628 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AL023583.1-201ENST00000607518 1143 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 MIR6820-201ENST00000611508 62 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 AC016542.2-201ENST00000624201 619 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms