Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL035410.1-201ENST00000427409 427 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 PSMA6P3-201ENST00000428242 164 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 MTATP6P13-201ENST00000438531 667 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 Z82190.1-201ENST00000454534 490 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC099563.1-201ENST00000456086 418 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AP1S2P1-201ENST00000457344 379 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AL591473.1-201ENST00000464297 313 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 KLF3P2-201ENST00000465138 268 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC007537.2-201ENST00000472093 511 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 ACTR3P3-201ENST00000480448 893 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 RPL35P6-201ENST00000490024 372 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 OR5H5P-201ENST00000503164 928 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 RNA5SP315-201ENST00000516340 116 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 RNA5SP312-201ENST00000517068 116 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 RNU6-201P-201ENST00000517100 61 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 PTP4A1P6-201ENST00000531034 478 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC022882.1-201ENST00000532142 501 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 NRBF2P1-201ENST00000587407 859 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AL591034.3-201ENST00000605511 685 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC091834.1-201ENST00000614543 472 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC104010.1-201ENST00000616889 150 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 U4.5-201ENST00000617137 123 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 RNA5SP196-201ENST00000625967 102 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VTA1Q9NP79 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VTA1Q9NP79 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VTA1Q9NP79 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VTA1Q9NP79 AL158163.1-201ENST00000603915 1649 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 RNU1-13P-201ENST00000384499 162 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 RNU2-8P-201ENST00000410727 190 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 HMGB3P23-201ENST00000414981 585 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 RAD23BP2-201ENST00000416003 1207 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VTA1Q9NP79 PSMA2P3-201ENST00000429685 675 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 OR4C10P-201ENST00000434991 931 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 RPL22P17-201ENST00000438729 315 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 RPL23AP52-201ENST00000439311 478 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 FAM103A2P-201ENST00000444122 354 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 TDGF1P1-201ENST00000445734 527 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 BTF3P5-201ENST00000457252 467 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 MTCO1P42-201ENST00000457379 726 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 RPS7P7-201ENST00000463499 571 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 RN7SL812P-201ENST00000493791 279 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC105252.1-201ENST00000503089 286 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC010460.1-201ENST00000507087 466 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AF213884.2-201ENST00000510417 903 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC008958.1-201ENST00000511047 682 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 RNU6-1178P-201ENST00000516674 107 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 OR5M7P-201ENST00000526140 972 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC009063.1-201ENST00000563342 702 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC087481.2-201ENST00000565492 330 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AL121834.1-201ENST00000572284 509 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC009977.1-201ENST00000586015 570 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC093227.2-201ENST00000589357 285 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC026368.1-201ENST00000614934 690 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.98□□□□□ -1.61
VTA1Q9NP79 MIR8059-201ENST00000620427 81 ntBASIC4.98□□□□□ -1.61
VTA1Q9NP79 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VTA1Q9NP79 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VTA1Q9NP79 AL049555.1-201ENST00000562834 1933 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms