Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 MIR4270-201ENST00000581799 70 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 MIR544B-201ENST00000582372 78 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 OR7E18P-201ENST00000592589 702 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 WISP1-OT1-201ENST00000602893 642 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL109653.1-201ENST00000603091 248 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 MIR7155-201ENST00000615925 56 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL353748.2-201ENST00000622148 471 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC018445.2-201ENST00000622987 260 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 U1.1-201ENST00000384101 164 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 HMGB1P11-201ENST00000413899 637 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC079780.1-201ENST00000428259 207 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 LARP1BP3-201ENST00000437229 869 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC091862.1-201ENST00000438016 1100 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AL138799.3-201ENST00000438968 350 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 RPL23AP89-201ENST00000439324 255 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AL162151.2-201ENST00000448875 158 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC097262.1-201ENST00000452559 548 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 snoU13.8-201ENST00000458890 104 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 RPL9P32-201ENST00000464118 620 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 RN7SL329P-201ENST00000467740 299 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 RPL7P1-201ENST00000468161 747 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 RPL7P9-201ENST00000468715 747 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 RN7SL354P-201ENST00000469282 294 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 RN7SL177P-201ENST00000476596 299 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 POU5F1P7-201ENST00000508759 541 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 MTND5P4-201ENST00000514978 288 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 IGKV1-32-201ENST00000519290 311 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 CR383656.7-201ENST00000548164 174 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC109446.2-201ENST00000567872 497 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC008088.1-201ENST00000580993 280 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 MTCYBP22-201ENST00000603788 447 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC079587.1-201ENST00000603846 277 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 DUXAP11-201ENST00000603858 526 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AL163642.2-201ENST00000604722 1019 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC114878.2-201ENST00000604863 1251 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 BCRP9-201ENST00000605312 388 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC211433.2-201ENST00000608433 387 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC103710.4-201ENST00000609301 899 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AC106028.5-201ENST00000610332 395 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 MIR7702-201ENST00000621931 59 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AL356266.1-201ENST00000623311 483 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 AF246928.1-201ENST00000623768 87 ntBASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP1AQ9HD42 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 SNORA31-201ENST00000362607 130 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 RNU6-1155P-201ENST00000363554 107 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 SNORD113.2-201ENST00000364166 89 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 RNU6-1207P-201ENST00000384343 107 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 MIR105-2-201ENST00000385083 81 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 RNU6-328P-201ENST00000390887 106 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AL031577.2-201ENST00000404133 280 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 MIR1179-201ENST00000408703 91 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 SNORA3C-201ENST00000408792 125 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 RNU6-920P-201ENST00000410926 92 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC099677.1-201ENST00000420575 175 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 COX6CP17-201ENST00000421389 185 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC018638.3-201ENST00000461273 132 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 SETP11-201ENST00000473027 690 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 RPS29P19-201ENST00000479709 171 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 RPL31P13-201ENST00000484151 370 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 RPL23AP55-201ENST00000498163 452 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC096751.1-202ENST00000502691 1067 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms