Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL024474.1-201ENST00000404655 591 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 AL358075.3-201ENST00000426289 226 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 AC013410.1-201ENST00000436223 1232 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 RPL7P54-201ENST00000438336 674 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 AL513321.1-201ENST00000441175 761 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 SYT14P1-201ENST00000481459 721 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 AC025881.1-201ENST00000518851 512 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 Y_RNA.354-201ENST00000365448 111 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 NCSTNP1-201ENST00000406229 144 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 AC011816.1-201ENST00000441346 546 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 NPM1P29-201ENST00000483112 803 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 MIR2276-201ENST00000516886 89 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 MYL12AP1-201ENST00000518490 515 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CHD8Q9HCK8 MIR583-201ENST00000384846 75 ntBASIC2.34□□□□□ -2.03
CHD8Q9HCK8 RNA5SP104-201ENST00000410989 118 ntBASIC2.34□□□□□ -2.03
CHD8Q9HCK8 RN7SKP58-201ENST00000411010 305 ntBASIC2.34□□□□□ -2.03
CHD8Q9HCK8 RNA5SP31-201ENST00000411144 127 ntBASIC2.34□□□□□ -2.03
CHD8Q9HCK8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.34□□□□□ -2.03
CHD8Q9HCK8 FO393414.1-201ENST00000428697 1184 ntBASIC2.34□□□□□ -2.03
CHD8Q9HCK8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.34□□□□□ -2.03
CHD8Q9HCK8 AK6P1-201ENST00000540219 478 ntBASIC2.34□□□□□ -2.03
CHD8Q9HCK8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.34□□□□□ -2.03
CHD8Q9HCK8 BX248123.2-201ENST00000606318 124 ntBASIC2.34□□□□□ -2.03
CHD8Q9HCK8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.34□□□□□ -2.03
CHD8Q9HCK8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.34□□□□□ -2.03
CHD8Q9HCK8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 HSPE1P16-201ENST00000426640 348 ntBASIC2.34□□□□□ -2.04
CHD8Q9HCK8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 NIPA2P2-201ENST00000496376 1083 ntBASIC2.34□□□□□ -2.04
CHD8Q9HCK8 RNA5SP217-201ENST00000515959 91 ntBASIC2.34□□□□□ -2.04
CHD8Q9HCK8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CHD8Q9HCK8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AC004925.1-201ENST00000624256 2706 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AL035551.1-201ENST00000446931 348 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 RN7SL442P-201ENST00000473804 320 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AC126121.1-201ENST00000482313 553 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 MLLT10P2-201ENST00000506434 249 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AC128657.1-201ENST00000549459 145 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AC135628.1-201ENST00000568867 534 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AC087565.3-202ENST00000642085 1603 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AC069528.2-201ENST00000624849 1991 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 SNORD74.4-201ENST00000364129 80 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AP1B1P2-201ENST00000416196 106 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 HMGN1P18-201ENST00000457642 277 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 AC010469.1-201ENST00000463864 576 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 FAM92A1P2-202ENST00000504766 877 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 MIR4738-201ENST00000579134 87 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 MIR3605-201ENST00000583214 100 ntBASIC2.33□□□□□ -2.04
CHD8Q9HCK8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHD8Q9HCK8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC008277.2-201ENST00000605196 797 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 MIR6845-201ENST00000613182 61 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC026523.2-201ENST00000625039 7739 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms